| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3614794 | NA (NA) | 4 (0.010) | 3/106 | NT | 100% | coding (2243/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor |
| ? | CP009273 | = 3614820 | 0 (0.000) | coding (2269/4236 nt) | rhsB | Rhs family putative polymorphic toxin, putative neighboring cell growth inhibitor | |||||
Only 100 of 223 total aligned reads displayed.
TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACG > CP009273/3614737‑3614837 | TCAGCGATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGa < 1:858114‑M2/66‑1 (MQ=255)TCAGCCATATCCGCGACGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc < 1:16797995‑M2/68‑1 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGTGAAAGGCCGGCTGAcc > 1:18607838‑M2/1‑68 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGccc > 1:7191075‑M2/1‑68 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc > 1:32368846‑M2/1‑68 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc > 1:17693576‑M2/1‑68 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc > 1:22271230‑M2/1‑68 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc < 1:22960991‑M2/68‑1 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc < 1:961041‑M2/68‑1 (MQ=255)TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGAcc < 1:524827‑M2/68‑1 (MQ=255) CAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCg < 1:10666822‑M2/68‑1 (MQ=255) cCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGCGAAAGGCCGGCTGACCGGt < 1:21070297‑M2/67‑1 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:23926689‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:9971341‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:18749469‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:9864015‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:2240521‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:6894353‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:23707253‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:28559381‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:30730450‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:32227767‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:10594499‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:3312690‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:33539576‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:33811353‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:4039529‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:14838963‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:15636053‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:16133709‑M2/1‑68 (MQ=255) GCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt > 1:109293‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGTTCGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:13409137‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:12901213‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:26480835‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:3771104‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:893993‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:12811180‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:22017032‑M2/1‑68 (MQ=255) CCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTg > 1:29398473‑M2/1‑68 (MQ=255) CATATCAGCGGAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt < 1:9321270‑M2/66‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCgg < 1:8819970‑M2/65‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCgg < 1:26238799‑M2/65‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCgg < 1:24931374‑M2/65‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt < 1:16724596‑M2/66‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt < 1:20613956‑M2/66‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt < 1:16522066‑M2/66‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGt < 1:25537194‑M2/66‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:26686006‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:37958‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:15275214‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:1796834‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:24849094‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:29779411‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:7152855‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:13838167‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:19865904‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa > 1:19188274‑M2/1‑68 (MQ=255) CATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGa < 1:18790109‑M2/68‑1 (MQ=255) CATATCAGCGAAGGGCACCGGGGGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCgg < 1:12913481‑M2/65‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTTAGAC < 1:14973670‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:6235333‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:13781599‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:32638855‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:362580‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:4567981‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:28921666‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:7907156‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:8501865‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:12021629‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:11723553‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:10245890‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:26921004‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:18408327‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:18568642‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:17406944‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:17012828‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:19641650‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:20036138‑M2/1‑68 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:2047678‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:21874285‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:22820019‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:23132562‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:15906496‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:24624853‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:27497236‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:27877916‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:27972332‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:28728211‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:30763928‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC < 1:31389171‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGAC > 1:31448118‑M2/1‑68 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGACAGAC < 1:14324570‑M2/68‑1 (MQ=255) gAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGACAGAC < 1:31867216‑M2/68‑1 (MQ=255) aGGGCCCCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:16601846‑M2/1‑67 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:32004668‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:5492883‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:1373426‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGG < 1:33284292‑M2/68‑1 (MQ=255) aGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACG > 1:28186641‑M2/1‑67 (MQ=255) gCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGcctttctcatcatacct > 1:4919578‑M2/1‑50 (MQ=255) | TCAGCCATATCAGCGAAGGGCACCGGGTGGCGGTGCATTACAGGTATGATGAGAAAGGCCGGCTGACCGGTGAGCGTCAGACGGTGCATCACCCGCAGACG > CP009273/3614737‑3614837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |