| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 278 (0.720) | 27 (0.080) | 10/98 | NT | 9.6% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 265 (0.790) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:4700773/67‑1GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGC < 1:3212808/67‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:7114903/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:27257512/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:15452756/68‑1 GGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGG < 1:14946095/68‑1 GTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGC > 1:14903404/1‑68 GTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGC > 1:3371073/1‑68 GGCTAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG < 1:2948516/67‑1 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGGATATTCGCCCGCAGATTGAAGAAGT > 1:18100182/1‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGT > 1:18121271/1‑68 TGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGT > 1:6462019/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGGGCCTATTCGCCAGCAGAGTGCTGAAGGAAA > 1:29487669/1‑68 GCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGAGAGAAGAAGTAAt > 1:18605417/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGTAGAAGTTAAT > 1:9630141/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:29093555/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:352378/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:11640039/1‑67 TCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:7723954/1‑67 TCTGTAAGCGAGTATTTACTTCTTAAATATGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAAT > 1:18716776/1‑67 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATCTTCGCCCGCAGATTGAAGAAGTAAATACTC > 1:27733969/1‑68 GTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTC > 1:27772634/1‑68 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCAGATTGAAGAAGTAAATACTCGCTT > 1:2885220/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCCGCAGATTGAAGAAGTAAATACTCGCTT > 1:31897944/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:22959177/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:7105147/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:5854423/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:26100688/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:27578152/1‑67 CGAGTATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTT > 1:18408238/1‑67 ATTTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGA > 1:29896999/1‑67 TTACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGC > 1:8177369/1‑67 ACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACA > 1:22662985/1‑68 ACTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACA > 1:7102321/1‑68 CTTCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAA > 1:18583638/1‑68 TCTTCAATCTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATG > 1:13069978/1‑68 CTGCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTC > 1:13650795/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCG < 1:8059404/68‑1 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:6452511/1‑67 GCTGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGC > 1:32074334/1‑67 TGGCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCG < 1:4522952/68‑1 GCGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCG < 1:25027002/38‑1 CGCATATTCGCCAGCAGATTGAAGAAGTAAATCCTCGCTTACAGAGCACAATGGCGCTTCGCGCGAG < 1:3303584/67‑1 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:12003853/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:28914829/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:25349168/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:23496168/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:23315541/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:20655754/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:16579224/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:1446823/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC > 1:14296143/1‑68 CGCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAG < 1:30603052/67‑1 CGCATATTCGCCAGCAGAGTGAAGAAGTAAATACTCGCTTACCGCGAACAATGGCGCTTCGCGCGA > 1:9909940/1‑66 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:4997542/67‑1 GCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < 1:3835028/67‑1 GTGGTGGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/410211‑410282‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcgCATATTCGCCAGCAGATTGAAGAAGTAAATACTCGCTTACAGAGCACAATGGCGCTTCGCGCGAGC < CP009273/410288‑410223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |