| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 278 (0.720) | 27 (0.080) | 10/98 | NT | 9.6% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 265 (0.790) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 401 total aligned reads displayed.
GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGG > CP009273/410216‑410348 | ggCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGa > 1:5524783/1‑68 (MQ=255) cGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAat > 1:8574987/1‑68 (MQ=255) gAATGCTCGCCCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAat < 1:23204679/67‑1 (MQ=255) aTGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAatat > 1:8921033/1‑67 (MQ=255) aTGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATg < 1:30106128/68‑1 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:23496168‑M2/1‑66 (MQ=255) gAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcag > 1:13650795‑M2/1‑58 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:3747964/68‑1 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:6690395/68‑1 (MQ=255) cgcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc > 1:1734031/1‑66 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:20735517/67‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:4663719/67‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:935573/67‑1 (MQ=255) cATTGTGCTCTGTACGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:21346967/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaaga > 1:13069978‑M2/1‑51 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:20154220/68‑1 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:24120688/1‑68 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:2469225/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:23683906/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:1793298/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:9751953/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:15312688/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:7017377/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:26271381/68‑1 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagt > 1:22662985‑M2/1‑48 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:22393729/1‑67 (MQ=255) gtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTc < 1:1150639/68‑1 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGGGcctattcgccagcagagtgctgaaggaaa > 1:29487669‑M1/1‑39 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagagagaagaagtaat > 1:18605417‑M1/1‑39 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:7840718/1‑67 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaat > 1:29896999‑M2/1‑43 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:1959082/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:21051179/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:1260128/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:16522354/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTATTCTGCg > 1:32103377/1‑68 (MQ=255) tGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt < 1:28919769/68‑1 (MQ=255) tGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt > 1:27768243/1‑68 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:7680017/68‑1 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:23346950/68‑1 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:6020813/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:7105147‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:5854423‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg > 1:25989440/1‑68 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg > 1:22148940/1‑68 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg > 1:21926181/1‑68 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:5409945/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg > 1:7451172/1‑68 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCGGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:2885220‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCGGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:31897944‑M2/1‑38 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactcgctt > 1:27578152‑M1/1‑29 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgc < 1:25027002‑M2/38‑4 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:25643263/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:30986602/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:31548715/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:18537978/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:6415170/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:14867875/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:402297/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:4485666/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:22833526/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:27263728/1‑67 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:27860108/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:12067651/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:17539922/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:27503627/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:18308380/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:29806061/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:16208823/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:11043175/66‑1 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:19386822/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:1279573/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:24364740/1‑68 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacaga > 1:352378‑M2/1‑30 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacaga > 1:29093555‑M2/1‑30 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCa < 1:6111817/66‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt < 1:26778577/68‑1 (MQ=255) ttACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagc > 1:8177369‑M1/1‑22 (MQ=255) tACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGtgtg > 1:15655866/1‑68 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagcaca > 1:6462019‑M2/1‑26 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagcaca > 1:18121271‑M2/1‑26 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:20360/1‑68 (MQ=255) aCTTCTTCAATCTGCGGGCGAATATCcgccagcagattgaagaagtaaatactcgcttacagagcaca > 1:18100182‑M2/1‑26 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:500457/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:1679104/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGa < 1:10921828/68‑1 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:19865135/1‑68 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:11743780/1‑68 (MQ=255) ttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGaa < 1:1843/68‑1 (MQ=255) tcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGatg > 1:1016321/1‑66 (MQ=255) tcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAg > 1:13250453/1‑68 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAttt < 1:28555156/68‑1 (MQ=255) ctgctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGCTGCGTTCCCAGTGTGGACGAAGATTTc > 1:14166922/1‑68 (MQ=255) ctgctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTc > 1:21711942/1‑68 (MQ=255) gctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGt > 1:28114783/1‑68 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc > 1:20655754‑M1/1‑2 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc > 1:1446823‑M1/1‑2 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc > 1:25349168‑M1/1‑2 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgag < 1:30603052‑M1/67‑66 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:913868/67‑1 (MQ=255) | GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGG > CP009273/410216‑410348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |