| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3701790 = | 125 (0.320) | 9 (0.030) | 6/88 | NT | 10.8% | intergenic (‑725/+186) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | 3701955 = | 50 (0.170) | intergenic (‑890/+21) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 111 total aligned reads displayed.
GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701866‑3701790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagcctgctcGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA > CP009273/3701955‑3702020 GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGCCCAAATTCGAAA > 1:21528029/1‑68GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAA > 1:13827626/1‑68 CCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAA > 1:27685093/1‑68 CCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAA > 1:20127528/1‑68 CCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAA > 1:24407833/1‑68 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:16908423/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:10720188/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:3837807/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:16180980/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:171970/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:19881104/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:210888/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:13131472/68‑1 CAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG < 1:12226629/68‑1 AGCAACGGCCCGCAGGGCGCGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAG > 1:1071513/1‑67 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTG < 1:2631355/68‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTG < 1:16810579/68‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT > 1:2377154/1‑67 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT < 1:13248297/67‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT > 1:11369672/1‑67 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT < 1:1914272/67‑1 AACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT > 1:18285421/1‑67 ACGGCCCGCAGTGCGAGCCACGAAGTGGCAAGTAATACTCAATCACCGACCAAATTCGAAAAGCCTGC < 1:19352031/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:23802923/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:20580972/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:24552733/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:27985742/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:28392120/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:21354992/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:11880481/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:14792523/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:13743056/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGC < 1:12290493/68‑1 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT > 1:32131682/1‑66 ACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCT > 1:10419679/1‑66 CGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCT < 1:12081045/68‑1 CGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCT < 1:27432764/68‑1 GTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTCGGTGAGGAGGCTTTTCGAATTTGGTCGGT > 1:31243126/1‑68 TCTATCACCGACCAAATTCGAAAAGCCTGCTCGTTGAGCCGGCTGTTCGAATTTGGTCGGGGATAGAG > 1:18986031/1‑68 caATCACCGACCAAATTCGAAAAGCCTGCTCGTTGACCAGGCTTTTCGAATTTGGTCGGTGATAGAGG < 1:2814946/66‑1 CTATCACCGACCAAATTCGAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGG < 1:3239977/68‑1 CTATCACCCACCAAATCCCAAACGCCGGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGG < 1:10916692/68‑1 CACCGACCAAATTCGAAAAGCCTGCTCGTTGGGCCGGCTTTTCGAATTTGGTCGGTGATAGAGGATTC > 1:6861105/1‑68 ACCGACCAAATTCGAAAAGCCTGCGCGGTGAGCAGGCGTTTCGAATTTGGTGGGTGATAGAGGATTCG > 1:31798721/1‑68 ACCAAATTCGAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAA > 1:23921948/1‑66 AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:11351669/1‑68 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:30562551/1‑67 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:11187129/1‑67 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:12101356/1‑67 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:19770196/1‑67 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:439537/1‑67 AAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > 1:5402224/1‑67 AAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTC > 1:18452641/1‑68 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGACCCTCCGACCCCTTCG > 1:7986112/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:1079146/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:3949531/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:30886307/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:10910608/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:6238856/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:7032577/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:7809269/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:8594671/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:9355306/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:9398651/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:16412371/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:13582475/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:17336564/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:23071393/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:14569511/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:14662550/1‑67 GCCTGCTCGTTGAGCAGGCTTTTCGAAGTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCG > 1:17565042/1‑67 GCCTGCTCGTTGAGCAGGATTTTAGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCt > 1:25678810/1‑66 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGATGATTCGAACCTCCGACCCCTTCGT > 1:30630880/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:19527115/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT > 1:29043456/1‑67 CCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGA > 1:2349275/1‑42 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTC > 1:9104303/1‑67 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:18509148/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:13362812/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:19003443/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:13138223/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:864338/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:15332933/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:16789211/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:20833281/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:21401219/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:11065850/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:27244288/66‑1 CTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGT < 1:24760776/66‑1 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG < 1:19968086/68‑1 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG > 1:2256921/1‑68 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG < 1:4486354/68‑1 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG < 1:29836545/68‑1 GCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCG < 1:28291381/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:19267920/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:2259202/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:2304639/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA < 1:23434124/68‑1 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGA > 1:30693964/1‑67 TCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGA < 1:2774636/67‑1 GCCAGCAACGGCCCGCAGGGCGAGCCACGAAGTGGCGAGTAATCCTCTATCACCGACCAAATTCGAAAAGCCTGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3701866‑3701790‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagcctgctcGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCTTCGTCCCGAA > CP009273/3701955‑3702020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |