BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3921522	431 (1.120)	25 (0.070)	5/100	NT	6.2%	coding (1442/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein
*	?	CP009273	= 3921534	370 (1.080)	25 (0.070)	5/100	NT	6.2%	coding (1430/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein

Only 100 of 139 total aligned reads displayed.

TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3921452‑3921522

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  CP009273/3921534‑3921468

TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:26905413/1‑68

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGATAGCGTCCCTTCTCTGATGTAATAAATTATCGCC                                                                        >  1:15469100/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCG                                                                       <  1:30358673/68‑1

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:22226702/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        <  1:21429846/67‑1

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        <  1:22494734/67‑1

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:2677490/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:11884393/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:15717691/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:6790083/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:15468427/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:13711797/1‑67

 TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        <  1:1454246/67‑1

  CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:3402532/68‑1

  CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:2486282/68‑1

  CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:12748128/68‑1

  CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:7000591/68‑1

  CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:11495473/68‑1

      GTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCCGC                                                                  >  1:20111022/1‑68

                                            TCTCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAG                            >  1:3851061/1‑68

                                            TCTCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAG                            >  1:20403104/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAATGTATTACAGCAGAGAAGGG                          >  1:3066670/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:5797004/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:14595185/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:7300834/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:30571827/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:17954599/1‑68

                                              TCTGCTGTAATAATTTATCGCCGCCTGATCAGACGCTGGCGGCGATAATTTATTACAGCAGAGAAGGG                          >  1:21266168/1‑68

                                                 GCTGTAATAATTTATCGCCGCCTGCTCAGCCGCTGGGGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:865830/1‑67

                                                 GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACTGCAGAGAAGGGAC                        >  1:8351083/1‑67

                                                 GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:27397725/1‑67

                                                 GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:20578939/1‑67

                                                   TGTAATAATTTATCGCCGCCTGCTCAGCCGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:1113886/1‑65

                                                   TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:27055446/1‑67

                                                   TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:18799189/1‑67

                                                   TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:29322445/1‑67

                                                   TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:8403660/1‑67

                                                              gaCGCCGCCTGCTCAGACGCTGGCGGCGATAATTTTTTACAGCAGAGAAGGGACGCTCTCGCGAACAG          >  1:13504968/3‑68

                                                                 GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:19582902/1‑67

                                                                 GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:25654886/1‑67

                                                                 GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:594798/1‑67

                                                                 GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:2291133/1‑67

                                                                 GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:4082650/1‑67

                                                                 GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCACGCGACCAGCA        >  1:9650204/1‑67

                                                                  CCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:6156381/1‑66

                                                                   CGCCTGCTCAGACGCTGGCGGTGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCT     <  1:17905595/68‑1

                                                                   CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:12900254/1‑65

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:2660541/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:1603298/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:15402037/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:28056752/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:4029643/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:13964484/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:6402955/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:24741092/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:23864624/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:9477713/68‑1

                                                                    GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:10208695/68‑1

                                                                    GCCTGCTAAGACGCTGGCGGCCATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:2328696/1‑68

                                                                      CTGGTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:20948042/68‑1

                                                                      CTGCTCAGTCGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:18461034/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:10011522/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:11583696/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:31228598/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:32008580/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:32048223/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:15733764/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:10049189/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:10921741/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:7374898/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:13727512/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:5841549/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:17136086/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:11038425/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:6897421/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:17126214/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:21934343/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:21450184/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:22425499/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:21070089/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:24248678/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:24713890/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:20759380/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:26715910/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:19391989/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2685950/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:18183060/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27321380/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27832202/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:28165574/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2926973/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:17682189/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:21901828/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:31032503/68‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:5645484/67‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:4572019/67‑1

                                                                      CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:21226354/67‑1

                                                                      CTGCTCAGACGCTCGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:13343247/68‑1

                                                                      CTGCGCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2527626/68‑1

                                                                      CTGCCCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:22019875/68‑1

TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3921452‑3921522

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  CP009273/3921534‑3921468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.