| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1238033 = | 523 (1.360) | 25 (0.100) | 15/76 | NT | 7.9% | coding (504/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| ? | CP009273 | 1238051 = | 228 (0.870) | coding (486/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A | |||||
Only 100 of 656 total aligned reads displayed.
TTGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA > CP009273/1237966‑1238100 | ttGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCg < 1:14697917/68‑1 (MQ=255)ttGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCg < 1:16058133/68‑1 (MQ=255)ctttaccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaag > 1:5119013‑M1/68‑68 (MQ=255)ctttaccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaag > 1:30844229‑M1/68‑68 (MQ=255) ttaccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGc > 1:4985294‑M1/66‑68 (MQ=255) accgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGccc < 1:1870505‑M1/5‑1 (MQ=255) ccgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaagg > 1:2841052‑M1/63‑64 (MQ=255) aTCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGccc < 1:24417014/67‑1 (MQ=255) cgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCg < 1:12192632‑M1/6‑1 (MQ=255) cgagcaccatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCg < 1:25261599‑M1/6‑1 (MQ=255) aCGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACAt < 1:6689370/68‑1 (MQ=255) aCGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCATCGGCCCGACAt < 1:22916836/68‑1 (MQ=255) ggTGTACCGATCAGTGAAATCAACATCGCAAAATTGCCTCCCCACAACGTGCTTTAGGCCCGACATGt > 1:21693941/1‑68 (MQ=255) accatttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACAt > 1:29831347‑M1/57‑66 (MQ=255) gtgtACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTc > 1:13043464/1‑68 (MQ=255) tACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCgg > 1:15389238/1‑67 (MQ=255) ttctggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACATGTCGGGc > 1:5929656‑M1/52‑68 (MQ=255) aCCGATCAGTTAAATCATCATGGCATGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg < 1:31650765/67‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg < 1:26885574/67‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:23954842/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg < 1:26068054/67‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:13974071/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCggg > 1:23616507/1‑67 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGc < 1:29240083/68‑1 (MQ=255) aCCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGc < 1:10534100/68‑1 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGCCATGTCGGGCCt > 1:19017275/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGcca > 1:32026811/1‑66 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGGCt > 1:12849643/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCtt > 1:27605249/1‑68 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:26287978/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:22342029/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:26610492/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:22646545/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:1005269/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:28035715/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:30038897/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:8890820/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:4355838/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:14154297/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:1325249/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:12590127/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:736832/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:11449429/1‑67 (MQ=255) gATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCt > 1:11096992/1‑67 (MQ=255) gATCAGTGAAATCAG‑ATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCtt > 1:14431650/1‑67 (MQ=255) ggctggcgttacgcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACATGTCGGGCCTTc > 1:27222464‑M1/48‑68 (MQ=255) tCAGTGAAATCAGGATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:23276535/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTcc < 1:24164640/68‑1 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTcc < 1:18394664/68‑1 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:30635148/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:9779580/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:17647387/1‑67 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc < 1:12040340/67‑1 (MQ=255) tCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTc > 1:18225205/1‑67 (MQ=255) aGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTcc > 1:24662827/1‑66 (MQ=255) tGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCAACATGTCGGGCCTTCCCCtt > 1:14825632/1‑68 (MQ=255) gAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCtt < 1:15208249/67‑1 (MQ=255) gAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCtt < 1:6224780/67‑1 (MQ=255) gAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTg < 1:20769157/68‑1 (MQ=255) aaTCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGcc > 1:13740479/1‑68 (MQ=255) aaTCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGc < 1:8336041/67‑1 (MQ=255) aaTCAGCATCGCAAGACTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGc < 1:25571729/67‑1 (MQ=255) aTCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCa > 1:9262298/1‑68 (MQ=255) aTCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCa > 1:16542028/1‑68 (MQ=255) tCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt > 1:9589656/1‑68 (MQ=255) tCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt < 1:1354792/68‑1 (MQ=255) tCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt < 1:9018078/68‑1 (MQ=255) tCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt < 1:3337444/68‑1 (MQ=255) cAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCAt > 1:10844801/1‑67 (MQ=255) gcaatgaaaccttcaccattgaatggcaaggggaaGGCCCGACATGTCGGGCCGTCCCCGTgccagtc < 1:22010943‑M1/33‑4 (MQ=255) aTCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCa < 1:6997120/66‑1 (MQ=255) aTCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAAt > 1:7900772/1‑68 (MQ=255) aTCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAAt < 1:31096469/68‑1 (MQ=255) gCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGt < 1:19215975/68‑1 (MQ=255) aTTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAgg > 1:7711376/1‑68 (MQ=255) aTTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAgg > 1:8063352/1‑68 (MQ=255) aTTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAgg > 1:21110085/1‑68 (MQ=255) ttGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAg < 1:10322278/66‑1 (MQ=255) ttGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGt < 1:4678170/68‑1 (MQ=255) gCCTCCCCACAACGTGCCTTCGGCCCGACAAGTCGGGCCTTCCCCTTGCCATTAAATGGTGAAGGttt > 1:19963920/1‑68 (MQ=255) ccACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGc < 1:19786673/68‑1 (MQ=255) ccACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGc < 1:17478777/68‑1 (MQ=255) atggcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGt < 1:20311030‑M1/55‑1 (MQ=255) acaACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGt > 1:24828621/1‑68 (MQ=255) aaCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTa > 1:19495568/1‑67 (MQ=255) aaCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTa > 1:11822820/1‑67 (MQ=255) gcaaggggaaGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc < 1:17091471‑M1/58‑1 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:18004463/1‑68 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:2868319/1‑68 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:2874844/1‑68 (MQ=255) aCGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAAc > 1:4048301/1‑68 (MQ=255) gTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACg > 1:31791354/1‑67 (MQ=255) tGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTTACgcc > 1:389508/1‑68 (MQ=255) ccTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgcca > 1:638271/1‑67 (MQ=255) ccTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgcca > 1:25824721/1‑67 (MQ=255) cTTCGGCCCGACTTGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccag < 1:21339807/67‑1 (MQ=255) cTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagc < 1:6098190/68‑1 (MQ=255) cacGGCCCGACATGGCGGGCCTCCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACgccagc < 1:17807743/65‑1 (MQ=255) GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGa > 1:5352229‑M1/1‑68 (MQ=255) GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGa > 1:15707187‑M1/1‑68 (MQ=255) | TTGGCATCCACGGTGTACCGATCAGTGAAATCAGCATCGCAAGATTGCCTCCCCACAACGTGCCTTCGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA > CP009273/1237966‑1238100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |