| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 196 (0.510) | 16 (0.050) | 9/90 | NT | 7.5% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 236 (0.760) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 655 total aligned reads displayed.
ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 | acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:18728063/1‑68 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt < 1:25978650/68‑1 (MQ=255) acTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGt > 1:19436929/1‑68 (MQ=255) gCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:22844500/68‑1 (MQ=255) gCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTcc < 1:14887351/68‑1 (MQ=255) tataCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCcac < 1:20469769/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:960187/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:9210911/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:16267654/68‑1 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:31093383/1‑68 (MQ=255) taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:1336363/1‑68 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCCCGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:1779014‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGGAAGCCATTGCTGCGTTCCCACATgc < 1:30324208‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCatgtgggaacgc > 1:5736375‑M1/1‑56 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:21056063‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:29298281‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:27532557‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:26660521‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:22709333‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:23743635‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:18947756‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:24351865‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:31720356‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17931102‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:25115914‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:3847815‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:10819702‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:12090667‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:6944624‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:4182689‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:506042‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:13671785‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:8546839‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:3191772‑M2/68‑3 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:10668108‑M2/1‑65 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:19096915‑M2/1‑63 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:14381738‑M2/1‑63 (MQ=255) tAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagca < 1:26288540‑M2/68‑7 (MQ=255) tAGCCGGGCAAACTAAACGCTGGCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:19777211‑M2/1‑62 (MQ=255) aGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaa < 1:20536265‑M2/68‑8 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatgg > 1:15015579‑M2/1‑58 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg > 1:27243367‑M2/1‑58 (MQ=255) gCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcg < 1:13872575/67‑1 (MQ=255) aaaCTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCa < 1:15913922/68‑1 (MQ=255) cTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTg < 1:23321541/68‑1 (MQ=255) tAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGa < 1:16714492/68‑1 (MQ=255) aCGCTGTCACGATCGGATGACGAAAGCCATTGATGCGTTCCCACATGCAGCAATGGCGGCACTGACgg > 1:17013747/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCAACATGCAGCAATGGCGGCACTGACGGa > 1:446957/1‑68 (MQ=255) gCTTTCACGATCGTATGACTAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccga > 1:26548877‑M2/1‑44 (MQ=255) gCTGTCACGATCGGATGACGCAAGCCATTGCTGCctgagggaacgccgcaatggctttcgtcatccga > 1:10340277‑M1/1‑34 (MQ=255) gTCACGATCGGATGACGAAAGCCATTGCAGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAAct > 1:8653075/1‑67 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagc > 1:31535266‑M2/1‑34 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:15709260/1‑68 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa < 1:30529475/68‑1 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa > 1:28501159/1‑68 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa < 1:29785566/68‑1 (MQ=255) tGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaaaaa > 1:24161476/1‑68 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:20780344/67‑1 (MQ=255) agAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:2005696/66‑1 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:24661845/1‑68 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAagagaagaga > 1:8113029/1‑67 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:6020342/1‑68 (MQ=255) cATTGGTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg < 1:22218708‑M1/67‑59 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:780877‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:12358755‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:21576328‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccgg < 1:25026921‑M1/68‑60 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg < 1:25705479‑M1/67‑59 (MQ=255) cATTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccg > 1:17235328‑M1/1‑9 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:26978646‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:11227586‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:12964672‑M1/68‑61 (MQ=255) aTTGCTGCatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggc < 1:5641298‑M1/68‑61 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:7508244/68‑1 (MQ=255) gctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:30732405‑M1/1‑5 (MQ=255) gctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTg > 1:14487055/1‑68 (MQ=255) ctgcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctac > 1:28935221‑M1/1‑4 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGaa > 1:20990089/1‑60 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:21285509/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:9024662/1‑68 (MQ=255) gcatgtgggaacgcagcattggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:10037486‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:5425533‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:22525301‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:2185910‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:27829998‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:12282357‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:281192‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:8043361‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:7891748‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:29135540‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:30954678‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:18441193‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:6459323‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:6241980‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:17397496‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:3569982‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:4954018‑M1/68‑67 (MQ=255) gcatgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:13214706‑M1/68‑67 (MQ=255) gcatgtgggaacgcagaaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacg < 1:25190049‑M1/68‑67 (MQ=255) catgtgggaacgcagcaatggctttcgtcatccgatcgtgacagcgtttagtttgcccggctacacgt > 1:6727883‑M1/1‑1 (MQ=255) | ACACTGCTTATACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGC > CP009273/2191186‑2191320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |