| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2191253 | 196 (0.510) | 16 (0.050) | 9/90 | NT | 7.5% | pseudogene (1301/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function |
| ? | CP009273 | = 2191263 | 236 (0.760) | pseudogene (1311/2847 nt) | yehH | DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function | |||||
Only 100 of 509 total aligned reads displayed.
TACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAA > CP009273/2191196‑2191330 | taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:16267654/68‑1 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:25845588/68‑1 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:3616902/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:2842115/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:28754655/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt > 1:2137951/1‑68 (MQ=255)taCGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACAt < 1:19431721/68‑1 (MQ=255) cGTGTAGCCGGTCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17439301‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAGACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:25138964‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:7951470‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:31568196‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17219273‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:17931102‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:18995810‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:19781101‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:21056063‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:506042‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:22812659‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:25310674‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:28086050‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:26660521‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:31775947‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgc < 1:14615243‑M2/68‑3 (MQ=255) cGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCAATGCTGCGTTCCCACATgc < 1:10037486‑M2/68‑3 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:13254696‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:10668108‑M2/1‑65 (MQ=255) gtgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca > 1:9037581‑M2/1‑65 (MQ=255) tgtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgca < 1:10853676‑M2/67‑4 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:8059395‑M2/1‑63 (MQ=255) gtAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagc > 1:13798967‑M2/1‑63 (MQ=255) aGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaa > 1:30808358‑M2/1‑61 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:26978646‑M2/68‑9 (MQ=255) gCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaat < 1:12964672‑M2/68‑9 (MQ=255) ccGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:6253028‑M2/68‑10 (MQ=255) ccGGGCAAACTAAACGCTCTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatg < 1:5680733‑M2/68‑10 (MQ=255) cGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatgg > 1:15015579‑M2/1‑58 (MQ=255) gggCAAACTAAACGCTGTCACGATCGGATGACTAAAGCCATTGCTGCGTTCCCACATgcagcaatggc > 1:663160‑M2/1‑57 (MQ=255) gCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcg > 1:12133965/1‑67 (MQ=255) aaaCTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATggcggc < 1:9389310/67‑1 (MQ=255) aaaCTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCa < 1:15913922/68‑1 (MQ=255) cTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTg < 1:14815816/68‑1 (MQ=255) tAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGa < 1:16714492/68‑1 (MQ=255) aaCGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACg < 1:27256951/68‑1 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa < 1:5775859/68‑1 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:30353368/1‑68 (MQ=255) cGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCAACATGCAGCAATGGCGGCACTGACGGa > 1:446957/1‑68 (MQ=255) gCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGa > 1:28971871/1‑67 (MQ=255) aTCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTgg > 1:22184608/1‑67 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATgcagcaatggctttcgtcatccgatcgtgacagc > 1:20504879‑M2/1‑34 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTggg < 1:13617074/67‑1 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:24120639/1‑68 (MQ=255) tCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGc > 1:24300771/1‑68 (MQ=255) ggATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaa < 1:30529475/68‑1 (MQ=255) aTGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaaaa > 1:22407071/1‑68 (MQ=255) tGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaaaaa < 1:29772402/68‑1 (MQ=255) tGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGAGCaaaa < 1:23642410/67‑1 (MQ=255) gACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCaaaatg > 1:22590579/1‑66 (MQ=255) gACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaag > 1:5407044/1‑68 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:7084305/67‑1 (MQ=255) cGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:10313060/67‑1 (MQ=255) agAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaaga < 1:2005696/66‑1 (MQ=255) gAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaag < 1:4332830/68‑1 (MQ=255) gAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAaagaag > 1:11857451/1‑68 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:3922518/1‑68 (MQ=255) aaaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga > 1:8663565/1‑68 (MQ=255) aaGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAagaaga < 1:12297421/67‑1 (MQ=255) aaGCCATTGCTGCGTTCCCACATGCAGCAATGGAGGCACTGACGGAACTTCTTGGGCAAAaagaag < 1:14344591/66‑1 (MQ=255) gCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGCCGGAACTTCGGGGGCTAAAAGAAgaga > 1:30169794/1‑67 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:6020342/1‑68 (MQ=255) ccATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAAc > 1:30974673/1‑68 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:7508244/68‑1 (MQ=255) aTTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAg < 1:27416800/68‑1 (MQ=255) tgctgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGtt < 1:24619940/68‑1 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:18731410/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc > 1:4869423/1‑68 (MQ=255) tgcGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgc < 1:859979/68‑1 (MQ=255) cGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCATAAAGAAGAGAACAGTTGgcgc > 1:18166037/1‑68 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGCCGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:11257088/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGATGAGAACAGTTGgcgc < 1:20923364/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:19227581/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGgcgc < 1:2776819/67‑1 (MQ=255) gTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCa < 1:24812761/68‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAt < 1:26158793/67‑1 (MQ=255) tCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCAt < 1:9147728/67‑1 (MQ=255) cccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTa > 1:21561419/1‑68 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:32010991/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:29296819/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:26486897/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:23439329/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:962539/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:12460463/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:2080823/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:16898814/68‑1 (MQ=255) ccACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTAt < 1:1532380/68‑1 (MQ=255) cacaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATg < 1:22305976/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGTTACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:6786252/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:31410007/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:20558187/68‑1 (MQ=255) acaTGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGc < 1:21761472/68‑1 (MQ=255) tGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTaa < 1:7804221/68‑1 (MQ=255) | TACGTGTAGCCGGGCAAACTAAACGCTGTCACGATCGGATGACGAAAGCCATTGCTGCGTTCCCACATGCAGCAATGGCGGCACTGACGGAACTTCTTGGGCAAAAAGAAGAGAACAGTTGGCGCATTATGCTAA > CP009273/2191196‑2191330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |