| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2269311 = | 334 (0.870) | 21 (0.060) | 8/96 | NT | 7.3% | coding (560/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 2269347 = | 245 (0.740) | coding (596/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family | |||||
Only 100 of 492 total aligned reads displayed.
AAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATT > CP009273/2269245‑2269378 | cgccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacg > 1:21509223‑M1/67‑68 (MQ=255)cgccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacg < 1:18956840‑M1/2‑1 (MQ=255) gccgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacg < 1:25716158‑M1/2‑1 (MQ=255) gccgaccagactcatccagccaaacaagacagtaattgccaccacccaccagaagttaggctgtacg < 1:19265518‑M1/2‑1 (MQ=255) ggCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:30667881/1‑68 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:872588/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:24085376/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:29796661/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:20336640/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:31076725/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:14782251/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:6276092/1‑67 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:11613689/1‑67 (MQ=255) gCTATTACGGCGATAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:28446336/1‑67 (MQ=255) cgagcagactcatccagccaaacaagacagtaattgccagcatccaccagaagttaggctgtacgac > 1:27986369‑M1/64‑67 (MQ=255) cgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacgac > 1:8509078‑M1/64‑67 (MQ=255) cgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacgac > 1:27246509‑M1/64‑67 (MQ=255) cgaccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtacgac > 1:7083017‑M1/64‑67 (MQ=255) tATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGAc > 1:10368169/1‑65 (MQ=255) ccagactcatccagccaaacaagactgtaattgccagcagccaccagaagttaggctgtaCGACGCt > 1:1362169‑M1/61‑67 (MQ=255) ccagactcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtaCGACGCTg < 1:25114369‑M1/8‑1 (MQ=255) ccagacgcatccagccaaacaagatagtaattgccagcagccaccagaagttaggctgtaCGACGCt > 1:14489065‑M1/61‑67 (MQ=255) ttACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGt < 1:30287824/68‑1 (MQ=255) ttACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGt < 1:25892325/68‑1 (MQ=255) ttACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGt < 1:25392891/68‑1 (MQ=255) tACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGtt > 1:10022572/1‑68 (MQ=255) aCGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGttt > 1:26278412/1‑68 (MQ=255) aCGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGttt > 1:31983977/1‑68 (MQ=255) aCGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGttt > 1:20659704/1‑68 (MQ=255) cggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGtttt > 1:7565926/1‑68 (MQ=255) ggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGttttt > 1:19592340/1‑68 (MQ=255) ctcatccagccaaacaagacagtaattgccagccgccaccagaagttaggctgttCCACGCTGgtttt < 1:17549392‑M1/13‑1 (MQ=255) ctcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgttCGGCGCTGttttt < 1:11277108‑M1/13‑1 (MQ=255) ctcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtaCGACGGTGttttt < 1:28805469‑M1/13‑1 (MQ=255) ctcatccagccaaacaagacagtaattgccagcagccaccagaagttaggctgtaCGACGCTGttttt < 1:12932567‑M1/13‑1 (MQ=255) gcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTg > 1:2208227/1‑68 (MQ=255) aaaGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGattat < 1:24650321/68‑1 (MQ=255) tCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTAtttt > 1:16091337/1‑67 (MQ=255) cGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTAtttt < 1:4467233/66‑1 (MQ=255) tctcTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACttt < 1:19776734/68‑1 (MQ=255) tctcTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACttt < 1:4010397/68‑1 (MQ=255) tctcTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACttt < 1:20873686/68‑1 (MQ=255) tctcTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACttt < 1:15476293/68‑1 (MQ=255) gggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcg > 1:9000316/1‑68 (MQ=255) gtaattgccagcagccaccagaagttaggctgtaCGCCGCGGTTTTTGTTTTTTTTTCTTTCCAGcgt < 1:520194‑M1/34‑1 (MQ=255) ggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcg > 1:18481963/1‑67 (MQ=255) ggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcg > 1:1707696/1‑67 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtc > 1:17383776/1‑68 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtc > 1:20799072/1‑68 (MQ=255) gACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtc > 1:608634/1‑68 (MQ=255) aCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcg > 1:6981971/1‑68 (MQ=255) cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt > 1:4647724/1‑68 (MQ=255) cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt > 1:22814047/1‑68 (MQ=255) aCGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTAc > 1:3436794/1‑68 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCCGCGTCGTACa > 1:4868549/1‑67 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAg < 1:16279394/68‑1 (MQ=255) ccagcagccaccagcagttaggctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTGgtagc < 1:6486863‑M1/40‑3 (MQ=255) ccagcagccaccagaagttaggctgtaCGGCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACa < 1:31225004‑M1/40‑1 (MQ=255) ccagcagccaccagaagttaggctgtaCGACGCTGTTTTTGTGTTTTTTAGTTTGCAGCGTCGTacc < 1:5565907‑M1/40‑2 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:25593665/67‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:9666542/67‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGc < 1:21047429/67‑1 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:14152964/1‑67 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCATACAGCCTa > 1:2663742/1‑67 (MQ=255) ttGATGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAAc < 1:15282755/68‑1 (MQ=255) ttGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTGCAGCCTa > 1:27705445/1‑66 (MQ=255) ttGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:12395854/1‑66 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:1324524/1‑68 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt < 1:16524754/68‑1 (MQ=255) tGAAGTATGGGCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:23704328/1‑68 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:2452350/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:111117/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:9097003/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:15717801/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:3045592/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:23482821/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTc < 1:28948511/67‑1 (MQ=255) gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTCCttt < 1:23050620/43‑1 (MQ=255) gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtg > 1:29282099/1‑68 (MQ=255) gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtg > 1:12737163/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:9554323/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:23335375/1‑68 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:14281025/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:18282297/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:3744922/1‑67 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:6864288/1‑66 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:10705583/1‑66 (MQ=255) tCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:22588028/1‑65 (MQ=255) cGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct > 1:24312373/1‑67 (MQ=255) cGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct > 1:2696740/1‑67 (MQ=255) cGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct > 1:13950411/1‑67 (MQ=255) gggATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct > 1:5694152/1‑65 (MQ=255) gctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg < 1:1312343‑M1/62‑1 (MQ=255) gATGCCGACGCTGTTTTTGCTTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 1:21926779/1‑67 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:8061546/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:10168387/67‑1 (MQ=255) tGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa < 1:4134060/68‑1 (MQ=255) tGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa < 1:12245448/68‑1 (MQ=255) aCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAt < 1:31631248‑M1/67‑1 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:18039900‑M1/68‑1 (MQ=255) | AAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATT > CP009273/2269245‑2269378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |