| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2269311 = | 334 (0.870) | 21 (0.060) | 8/96 | NT | 7.3% | coding (560/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 2269347 = | 245 (0.740) | coding (596/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family | |||||
Only 100 of 428 total aligned reads displayed.
CAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGT > CP009273/2269280‑2269413 | cAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGcgtcgt > 1:4647724/1‑68 (MQ=255)attgccagcagccaccagaagttaggctgtacgacgctggaaagtaaaataatcaaaaacagcgtcgt < 1:872111‑M2/1‑1 (MQ=255)attgccagcagccaccagaagttaggctgtacgacgctggaaagtaaaataatcaaaaacagcgtcgt < 1:31631248‑M2/1‑1 (MQ=255) gCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACa > 1:3070873/1‑67 (MQ=255) ccagcagccaccagaagttaggctgtaCGACGCTGTTTTTGTGTTTTTTAGTTTGCAGCGTCGTacc < 1:5565907‑M1/40‑2 (MQ=255) ccagcagccaccagaagttaggctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACa < 1:21951604‑M1/40‑1 (MQ=255) cagcagccaccagaagttaggctgtacgacgctggaaagtaaaataatcaaaaacagcgtcgTACAGc < 1:1312343‑M2/6‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGcc < 1:9051646/68‑1 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGcc < 1:17679350/68‑1 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:23388999/1‑67 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:14152964/1‑67 (MQ=255) aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:22629468/1‑67 (MQ=255) ttGATGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAAc < 1:15282755/68‑1 (MQ=255) ttGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGcc < 1:28598621/64‑1 (MQ=255) ttGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:9569233/1‑66 (MQ=255) ttGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTa > 1:12395854/1‑66 (MQ=255) ttGAAGTATGGGCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAAc < 1:10059990/68‑1 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:29670315/1‑68 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt < 1:16524754/68‑1 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt < 1:21512876/68‑1 (MQ=255) tGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:15658503/1‑68 (MQ=255) gAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:10334560/1‑67 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:22028213/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:19916107/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:27941923/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:13823414/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:3045592/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACt > 1:111117/1‑65 (MQ=255) aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTc < 1:28948511/67‑1 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:4471509/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:6502927/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:24571651/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:14338737/1‑68 (MQ=255) tATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtgg > 1:11891456/1‑68 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:15398036/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:18282297/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:3744922/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:1279510/1‑67 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:16669509/1‑67 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:16247610/1‑66 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:6864288/1‑66 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:6294270/1‑66 (MQ=255) tCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCtggtg > 1:3578865/1‑65 (MQ=255) cGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGgct > 1:25473898/1‑67 (MQ=255) ggATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 1:13376439/1‑68 (MQ=255) gctgtaCGGCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg < 1:10519554‑M1/62‑1 (MQ=255) gctgtaCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg < 1:26592548‑M1/62‑1 (MQ=255) gATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg > 1:6126209/1‑67 (MQ=255) tgtacgacgctggaaagtaaaataatcaaaaacagcgtcgTACAGCCTAACTTCTGGTGGCTGCTgg < 1:8358000‑M2/27‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:21745410/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:8061546/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg < 1:8580471/67‑1 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGc > 1:28010756/1‑68 (MQ=255) aTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGc > 1:31211860/1‑68 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:23587814‑M1/68‑1 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:18039900‑M1/68‑1 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:7771587‑M1/68‑1 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt > 1:27679774‑M1/1‑68 (MQ=255) CGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt > 1:13706144‑M1/1‑68 (MQ=255) GACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:2021637‑M1/67‑1 (MQ=255) GACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:17198762‑M1/67‑1 (MQ=255) GCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:31425636‑M1/64‑1 (MQ=255) GCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:31985364‑M1/64‑1 (MQ=255) GCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTg > 1:13108911‑M1/1‑68 (MQ=255) TGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAtt < 1:26708267‑M1/62‑1 (MQ=255) TGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTc > 1:1019702‑M1/1‑68 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCtt < 1:25353902/67‑1 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTg < 1:22185073/68‑1 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTg < 1:19500251/68‑1 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAACCTCTGGTGGCTGCTGGCAATTACTGTCtt < 1:2301615/67‑1 (MQ=255) ttttGATTATTTTACTTTCCAGCGTCGTACAGCCTAAATTCTGGTGGCTGCTGGCAATTACTGTCtt < 1:3016198/67‑1 (MQ=255) tGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGttt > 1:12224376/1‑68 (MQ=255) attattTTACTTTCCAGCGTCGTACCGCCTAACTTCTGGTGGCTGCTTGCAATTACTGTCTTGTTTg > 1:4290171/1‑67 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTg > 1:26265821/1‑67 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTg > 1:25738684/1‑67 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTg > 1:9209279/1‑67 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTg > 1:4222487/1‑67 (MQ=255) attattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTg > 1:29263467/1‑67 (MQ=255) ttattTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTgg < 1:27437751/67‑1 (MQ=255) ttttACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:19268204/68‑1 (MQ=255) taatcacaaacagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:16040918‑M2/50‑1 (MQ=255) aaatcaaaaacagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTgg < 1:13201346‑M2/50‑1 (MQ=255) aCTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:17469357/1‑68 (MQ=255) cTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAg < 1:3920494/68‑1 (MQ=255) ccAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTg > 1:18428025/1‑68 (MQ=255) cagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTgg < 1:4917245‑M2/60‑1 (MQ=255) cagcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTgg < 1:25114369‑M2/60‑1 (MQ=255) agcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTgg > 1:25626846‑M2/8‑67 (MQ=255) agcgtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTATCTTGTTTGGCTGGATGCGTCTgg > 1:14489065‑M2/8‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCgg < 1:11280783‑M2/64‑1 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:12975334‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:6935121‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:7083017‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:20998651‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:20757405‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:26050747‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:27008317‑M2/5‑67 (MQ=255) gtcgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGCTCg > 1:23963557‑M2/5‑67 (MQ=255) cgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCg > 1:5202384‑M2/3‑68 (MQ=255) cgTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCg < 1:18956840‑M2/66‑1 (MQ=255) | CAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGT > CP009273/2269280‑2269413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |