| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2636459 | 348 (0.900) | 16 (0.060) | 6/84 | NT | 5.1% | intergenic (‑256/+29) | rodZ/rlmN | MreB assembly cytoskeletal protein/dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent |
| ? | CP009273 | = 2636469 | 332 (1.150) | intergenic (‑266/+19) | rodZ/rlmN | MreB assembly cytoskeletal protein/dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent | |||||
Only 100 of 880 total aligned reads displayed.
AACGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCACCCTGCATC > CP009273/2636392‑2636524 | aaCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGT < 1:17425085‑M1/68‑1 (MQ=255)aaCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGT < 1:15502928‑M1/68‑1 (MQ=255) ccGCACCGTTAATATTGACCTGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:11557875/67‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:9733762/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:23073576/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:2321841/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:18234861/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:17825868/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:27682694/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:30029028/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:15858239/68‑1 (MQ=255) aCGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTa < 1:9162543/68‑1 (MQ=255) cGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTAc < 1:28478863/68‑1 (MQ=255) cGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTAc < 1:19618320/68‑1 (MQ=255) cGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTAc < 1:2664569/68‑1 (MQ=255) cGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTAc < 1:11407405/68‑1 (MQ=255) gCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACa < 1:8515871/68‑1 (MQ=255) aCCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATa < 1:11926188/68‑1 (MQ=255) cGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATaaa < 1:3058985/68‑1 (MQ=255) cGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATaaa < 1:4761765/68‑1 (MQ=255) gTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAg < 1:2468479/68‑1 (MQ=255) atatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAac > 1:15264187‑M2/1‑66 (MQ=255) atatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAac > 1:26102269‑M2/1‑66 (MQ=255) tatTGACCAGACAATTGCAACTTAATGCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc > 1:5362078‑M2/1‑65 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc < 1:31259490‑M2/68‑4 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc < 1:363025‑M2/68‑4 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc < 1:16484056‑M2/68‑4 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc < 1:12149528‑M2/68‑4 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc < 1:23522410‑M2/68‑4 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc > 1:19417615‑M2/1‑65 (MQ=255) tatTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAacc > 1:6323043‑M2/1‑65 (MQ=255) ttGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgt < 1:22472400‑M2/68‑6 (MQ=255) ttGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgt < 1:10972422‑M2/68‑6 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGGCACGGTACATAAAGTAaccgtggcg > 1:21659380‑M2/1‑59 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTtactttatgtaccgtggcg > 1:13892080‑M1/1‑49 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggcg < 1:17676984‑M2/68‑10 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggcg < 1:6589777‑M2/68‑10 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggc > 1:24335007‑M2/1‑59 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggc > 1:23955747‑M2/1‑59 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggc > 1:10382686‑M2/1‑59 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggc > 1:1072187‑M2/1‑59 (MQ=255) ccAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggc > 1:16918806‑M2/1‑59 (MQ=255) cAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggcgtaatg < 1:20686267‑M2/68‑15 (MQ=255) cAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggcgtaatg < 1:7467349‑M2/68‑15 (MQ=255) cAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAaccgtggcgtaatg < 1:5875203‑M2/68‑15 (MQ=255) aaTTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATgg < 1:21001792/68‑1 (MQ=255) aaTTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATgg < 1:2927201/68‑1 (MQ=255) aaTTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATgg < 1:4833000/68‑1 (MQ=255) ttGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCt < 1:19973617/68‑1 (MQ=255) ttGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCt < 1:26908707/68‑1 (MQ=255) ttGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCt < 1:19028767/68‑1 (MQ=255) ttGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCt < 1:2365445/68‑1 (MQ=255) gCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTa > 1:18578170/1‑67 (MQ=255) aaCTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCa > 1:25557744/1‑68 (MQ=255) cTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAg > 1:20405454/1‑67 (MQ=255) cTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAg > 1:7020560/1‑67 (MQ=255) aaTACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGAcc > 1:14953410/1‑67 (MQ=255) aTACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGc < 1:830927/68‑1 (MQ=255) tACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCt < 1:4341189/68‑1 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:10197472/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:8773368/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:22221322/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:12550189/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:13576387/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:3157166/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:30239246/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:25874575/1‑68 (MQ=255) aCTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCtt > 1:17269892/1‑68 (MQ=255) tcattcatAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTaa > 1:18756448/1‑68 (MQ=255) tcattcatAAAAAATTACGCCACGGTAAATAAAGTAAACCAGGCGTAATGGCTATCAGAAAGCTTTaa > 1:28780977/1‑68 (MQ=255) ttcatAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGt < 1:22832776/68‑1 (MQ=255) aaaaCATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATg > 1:10011507/1‑68 (MQ=255) agccATTACGCCACGGTACATTAAGTAACCGTGGCGTATTGGCTATCAGACCGCGTTAATGTCGATg > 1:22935490/4‑67 (MQ=38) aaCATTACGCCACTGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGc < 1:7834600/68‑1 (MQ=255) aaCATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGc < 1:29930251/68‑1 (MQ=255) aaCATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGc < 1:26287428/68‑1 (MQ=255) aaCATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGc < 1:6111312/68‑1 (MQ=255) aaCATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGc < 1:31887409/68‑1 (MQ=255) ccATTACGCCACGGTACATAAAGTAACCGTGGGGTATTGGGTTTCAGACCGGTTTAATGTCGATGGCt > 1:25028309/2‑68 (MQ=255) cATTACGCCACGGTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattg < 1:11801133‑M1/68‑55 (MQ=255) cATTACGCCACGGTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattg < 1:3293375‑M1/68‑55 (MQ=255) cATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCt > 1:27243298/1‑67 (MQ=255) aTTACGCCACGGTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattg > 1:4160856‑M1/1‑13 (MQ=255) tACGCCACGGTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtct < 1:20156553‑M1/68‑58 (MQ=255) aCGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCAcc < 1:16242038/68‑1 (MQ=255) aCGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCAcc < 1:5180390/68‑1 (MQ=255) aCGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCAcc < 1:30876417/68‑1 (MQ=255) aCGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCAcc < 1:19152637/68‑1 (MQ=255) cGCCACGGTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctgg < 1:5569489‑M1/68‑60 (MQ=255) gCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCAc > 1:21933961/1‑65 (MQ=255) ccACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCACCCt > 1:2793848/1‑67 (MQ=255) aCGGTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaa < 1:7315068‑M1/68‑64 (MQ=255) ggTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:12863647‑M1/68‑66 (MQ=255) ggTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:7580262‑M1/68‑66 (MQ=255) ggTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:3964824‑M1/68‑66 (MQ=255) ggTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:8102334‑M1/68‑66 (MQ=255) ggTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:21491352‑M1/68‑66 (MQ=255) ggTtactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:9586199‑M1/68‑66 (MQ=255) ggTACATAAAGTAaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata > 1:13104021‑M2/1‑13 (MQ=255) cgttactttatgtaccgtggcgtaatgttttatgaatgaagtattaagttgcaattgtctggtcaata < 1:14182342‑M1/67‑66 (MQ=255) | AACGCACCGTTAATATTGACCAGACAATTGCAACTTAATACTTCATTCATAAAACATTACGCCACGGTACATAAAGTAACCGTGGCGTAATGGCTATCAGACCGCTTTAATGTCGATGGCTTCACCCTGCATC > CP009273/2636392‑2636524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |