| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2691481 | 362 (0.940) | 29 (0.080) | 15/100 | NT | 7.8% | coding (429/636 nt) | pgpC | phosphatidylglycerophosphatase C, membrane bound |
| ? | CP009273 | = 2691501 | 364 (1.060) | coding (409/636 nt) | pgpC | phosphatidylglycerophosphatase C, membrane bound | |||||
Only 100 of 594 total aligned reads displayed.
GACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGA > CP009273/2691415‑2691547 | gACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTG > 1:15421787‑M1/1‑67 (MQ=255) ccTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCg < 1:18908336/68‑1 (MQ=255) ccTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCg < 1:31867036/68‑1 (MQ=255) ccTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCg < 1:7161646/68‑1 (MQ=255) ccTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCg < 1:15194354/68‑1 (MQ=255) ccTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCg < 1:21531631/68‑1 (MQ=255) cTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGa < 1:20323558/68‑1 (MQ=255) cTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGa > 1:14438639/1‑68 (MQ=255) tCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAg < 1:20016741/68‑1 (MQ=255) tCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAg < 1:4592845/68‑1 (MQ=255) tCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAg < 1:4997038/68‑1 (MQ=255) tCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAg < 1:27384802/68‑1 (MQ=255) tCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAg < 1:807321/68‑1 (MQ=255) tCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAg < 1:27927627/68‑1 (MQ=255) cATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGa > 1:9838295/1‑68 (MQ=255) tGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGAtt > 1:11719660/1‑68 (MQ=255) tCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTa > 1:2856303/1‑67 (MQ=255) cccAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTaa > 1:27165085/1‑67 (MQ=255) aCATCGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:3668779/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTATCCcgcg > 1:31053050/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:13904586/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:19204513/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:5446630/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:24549874/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:17652705/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:26239018/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgcg > 1:31714527/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGAATAACCcgcg > 1:16614900/1‑68 (MQ=255) aCAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCGGccggggggtaatgttatc > 1:31323482‑M1/1‑49 (MQ=255) cAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCcgc < 1:23708232/66‑1 (MQ=255) cGCCTCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcag > 1:29214411‑M2/1‑65 (MQ=255) cGCATCGTCAATACCGAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcag > 1:26063660‑M2/1‑65 (MQ=255) cGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcag > 1:18580999‑M2/1‑65 (MQ=255) cGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcag > 1:3826103‑M2/1‑65 (MQ=255) cGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcag > 1:2068617‑M2/1‑65 (MQ=255) cGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcag > 1:29880997‑M2/1‑65 (MQ=255) gCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcagc > 1:9166678‑M2/1‑64 (MQ=255) tCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGc > 1:10960863/1‑68 (MQ=255) cAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGc < 1:30708915/67‑1 (MQ=255) cAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGc < 1:2142042/67‑1 (MQ=255) cAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGc < 1:11898707/67‑1 (MQ=255) cAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGc < 1:5776728/67‑1 (MQ=255) tACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcagccaaattcagc > 1:14773231‑M2/1‑54 (MQ=255) aCCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATc > 1:27762819/1‑68 (MQ=255) aCCCAACCACCATAGACACGCTGAATTTGGCTGccgcgggttaatcttatcgcccgccaaattcagcg > 1:767689‑M1/1‑33 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:29588167/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:9414600/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:26721249/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:12879522/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:19338430/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:22661448/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:21831036/1‑68 (MQ=255) cccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCg > 1:13440631/1‑68 (MQ=255) ccATCCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGa < 1:22032572/68‑1 (MQ=255) ccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcagccaaattcagcgtg > 1:25148685‑M2/1‑51 (MQ=255) ccAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGa < 1:625685/68‑1 (MQ=255) cAACCACCCTCGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcagccaaattcagcgtgg > 1:10378861‑M2/1‑50 (MQ=255) cAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcagccaaattcagcgtgg > 1:12421806‑M2/1‑50 (MQ=255) cAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGaa < 1:23534215/68‑1 (MQ=255) aaCCACCATCGCCACGCTGAATTTGCCGCGCGATACCATTAACCCGCGGcagccaaattcagcgtggc > 1:28940063‑M2/1‑49 (MQ=255) aaCCACCATCCCCACGCTGAATTTGGCTGGCGATAAGAATACCCCGCGCcagccaaattcagcgtggc > 1:28190313‑M2/1‑49 (MQ=255) accaccATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAAt > 1:23940940/1‑68 (MQ=255) accaccATAGCCACGCTGAATTTGGCTGGCCATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAAt > 1:3373740/1‑68 (MQ=255) caccaTAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATaa > 1:8574040/1‑68 (MQ=255) accaTAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATaa > 1:15870540/1‑67 (MQ=255) accaTAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATaa > 1:21149599/1‑67 (MQ=255) accaTAGCCACGCTGAATTTGGATGGCTATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATaaa > 1:23298971/1‑68 (MQ=255) caTAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGcagccaaattcagcgtggctatggt > 1:25613593‑M2/1‑43 (MQ=255) aTAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAAcc > 1:4089556/1‑67 (MQ=255) tAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGc < 1:19642098/68‑1 (MQ=255) aGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCt > 1:24247711/1‑68 (MQ=255) aGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCt > 1:6995549/1‑68 (MQ=255) gCCACGCTGATTTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCt > 1:16287514/1‑67 (MQ=255) gCCACGCTGAATTTGGCTGccgcgggttaatcttatcgccagccaaattcagcgtggctatggtggtt > 1:24867802‑M1/1‑19 (MQ=255) ccACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTc > 1:1721093/1‑68 (MQ=255) ccACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTc > 1:10027900/1‑68 (MQ=255) cACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCa > 1:17603175/1‑68 (MQ=255) cACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCa > 1:8672315/1‑68 (MQ=255) cACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCa > 1:30474928/1‑68 (MQ=255) cACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCa > 1:30196525/1‑68 (MQ=255) cGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAAc < 1:9033054/68‑1 (MQ=255) cGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAAc < 1:12039240/68‑1 (MQ=255) tGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCa > 1:23015527/1‑67 (MQ=255) aTTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCg < 1:12645412/67‑1 (MQ=255) tttGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGc < 1:6762044/68‑1 (MQ=255) tttGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGc < 1:25287065/68‑1 (MQ=255) tttGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGc < 1:13063581/68‑1 (MQ=255) tttGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGc < 1:31977759/68‑1 (MQ=255) ggctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGc < 1:17044342/68‑1 (MQ=255) ggctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGc < 1:2439478/68‑1 (MQ=255) ggctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGc < 1:10634783/68‑1 (MQ=255) gctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCg > 1:21735420/1‑68 (MQ=255) gctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCg > 1:22810481/1‑68 (MQ=255) gctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCg > 1:19915143/1‑68 (MQ=255) gctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCg > 1:18250301/1‑68 (MQ=255) gctggcGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCg > 1:11352733/1‑68 (MQ=255) gCTGccgcgggttaatcttatcgccagccaaattcagcgtggctatggtggttgggtattgacgatgc > 1:17934190‑M1/1‑4 (MQ=255) gCTGccgcgggttaatcttatcgccagccaaattcagcgtggctatggtggttgggtattgacgatgc > 1:9636869‑M1/1‑4 (MQ=255) cTGccgcgggttaatcttatcgccagccaaattcagcgtggctatggtggttgggtattgacgatgcg > 1:5256713‑M1/1‑3 (MQ=255) cTGccgcgggttaatcttatcgccagccaaattcagcgtggctatggtggttgggtattgacgatgcg > 1:12232443‑M1/1‑3 (MQ=255) | GACCTTTTCATGTCCCAGACAACGCATCGTCAATACCCAACCACCATAGCCACGCTGAATTTGGCTGGCGATAAGATTAACCCGCGGCAGCCAGGGCGTATCGAAATAAACCGCTTCAACCAGCGGCTGCGGA > CP009273/2691415‑2691547 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |