| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3000957 = | 263 (0.680) | 14 (0.050) | 7/80 | NT | 6.7% | coding (89/1197 nt) | ygeX | 2,3‑diaminopropionate ammonia lyase, PLP‑dependent |
| ? | CP009273 | 3000973 = | 199 (0.720) | coding (105/1197 nt) | ygeX | 2,3‑diaminopropionate ammonia lyase, PLP‑dependent | |||||
Only 100 of 359 total aligned reads displayed.
ATTGATATCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGAT > CP009273/3000890‑3001024 | aTTGATATCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCaa > 1:25274456/1‑68 (MQ=255) ttGATATCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCaa < 1:23387559/67‑1 (MQ=255) ttGATATCGCCGATAACAAATTGTTCAACGGCGAAACATCACCGCTCTTTTCTCAAAGCCAGGCCaa > 1:21701314/1‑67 (MQ=255) aaggtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtgga < 1:29005003‑M1/1‑1 (MQ=255) tatCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTg < 1:31593230/67‑1 (MQ=255) ggtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTg < 1:10153539‑M1/5‑1 (MQ=255) ggtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTg < 1:1923340‑M1/5‑1 (MQ=255) ggtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTg < 1:18778622‑M1/5‑1 (MQ=255) ggtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTg < 1:1574865‑M1/5‑1 (MQ=255) ggtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTg < 1:15495833‑M1/5‑1 (MQ=255) gtttgcgagatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggATCTGgc < 1:25652165‑M1/7‑1 (MQ=255) atCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgc > 1:31964398/1‑68 (MQ=255) atCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgc > 1:28262470/1‑68 (MQ=255) atCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgc > 1:27311072/1‑68 (MQ=255) atCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgc > 1:10726902/1‑68 (MQ=255) atCGCCGATAACAAATTTTTCAACGGAGAAACATCACCGCTCTTTTCGCACAGCCAGGCCAAACTGgc > 1:30742913/1‑68 (MQ=255) cGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgc < 1:11756129/68‑1 (MQ=255) gCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgcg > 1:18287948/1‑68 (MQ=255) gCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgcg < 1:29075159/68‑1 (MQ=255) gCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgcg < 1:17958358/68‑1 (MQ=255) gCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgcg < 1:28802004/68‑1 (MQ=255) gCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgc > 1:18442070/1‑67 (MQ=255) ccGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgcg > 1:14422317/1‑67 (MQ=255) ccGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGgcgcg > 1:7830985/1‑67 (MQ=255) agatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTGGCGCGCCAg < 1:25935252‑M1/14‑1 (MQ=255) tAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAg < 1:2217715/67‑1 (MQ=255) tAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAg < 1:894021/67‑1 (MQ=255) gatcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTGGCGCGCCAg > 1:19548898‑M1/54‑67 (MQ=255) atcgtccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTGGCGCGCCAGtt < 1:26705848‑M1/16‑1 (MQ=255) aaaTTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTcca < 1:10499445/68‑1 (MQ=255) ccagcgcacaaagcggtgttgggcgataaccagctattttctggtggAACTGGCGCGCCAGTTccacc > 1:6397086‑M1/48‑68 (MQ=255) aTTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTccacc > 1:24400686/1‑68 (MQ=255) aTTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTccacc > 1:19044429/1‑68 (MQ=255) tttCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGa < 1:20986113/68‑1 (MQ=255) tttCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGa < 1:9075861/68‑1 (MQ=255) tttCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGa < 1:24808256/68‑1 (MQ=255) ttCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGaa > 1:23963740/1‑68 (MQ=255) gcacaaagcggtgttgggcgataaccagctattttctggtggAACTGGCGCGCCAGTTCCACCAGa > 1:1030162‑M1/43‑66 (MQ=255) aaCGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAAt < 1:5626389/68‑1 (MQ=255) aaCATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGtt < 1:28337675/68‑1 (MQ=255) aCATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTa > 1:30955943/1‑68 (MQ=255) aTCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATc < 1:15629531/68‑1 (MQ=255) aTCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATc < 1:26420947/68‑1 (MQ=255) aTCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATc < 1:10794560/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:4310123/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:27027832/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:5238695/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:29443431/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:14260386/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:22688278/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:8316189/68‑1 (MQ=255) cACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGATGGTTATCGc < 1:20104550/68‑1 (MQ=255) cACCGCGCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:30403128/68‑1 (MQ=255) cACCGCGCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc < 1:7112704/68‑1 (MQ=255) aCCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGcc < 1:12084103/68‑1 (MQ=255) aCCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc > 1:22973473/1‑67 (MQ=255) aCCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc > 1:14878332/1‑67 (MQ=255) aCCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGc > 1:8114423/1‑67 (MQ=255) ccGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGccc < 1:20556355/68‑1 (MQ=255) cGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCa < 1:25136020/68‑1 (MQ=255) cGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCa < 1:10012260/68‑1 (MQ=255) cGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCa < 1:29613358/68‑1 (MQ=255) cGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCa < 1:30677238/68‑1 (MQ=255) gCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCa > 1:9507737/1‑67 (MQ=255) tctTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAac > 1:8818135/1‑67 (MQ=255) tctTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAac < 1:15319288/67‑1 (MQ=255) tctTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAac < 1:614159/67‑1 (MQ=255) tctTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAac > 1:30532772/1‑67 (MQ=255) tctTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGATATCGCCCAac > 1:30158281/1‑67 (MQ=255) ctTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAacac < 1:32118959/68‑1 (MQ=255) tttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACAcc > 1:27758742/1‑67 (MQ=255) tttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACAcc > 1:22374645/1‑67 (MQ=255) tttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCg < 1:6758613/68‑1 (MQ=255) tttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCg < 1:17259355/68‑1 (MQ=255) ccagctattttctggtggAACTGGCGCGCCAGTTGCACCAGAAATTAGCTGGTTATCGAccaacccc < 1:27847355‑M1/49‑4 (MQ=255) ttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGc < 1:6831860/68‑1 (MQ=255) ttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGc < 1:4795282/68‑1 (MQ=255) ttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGc < 1:13283364/68‑1 (MQ=255) ttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGc < 1:4061190/68‑1 (MQ=255) ttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGc < 1:22608679/68‑1 (MQ=255) ttCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGc < 1:16349676/68‑1 (MQ=255) cGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCtt < 1:4923346/68‑1 (MQ=255) cGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCtt < 1:19896901/68‑1 (MQ=255) aaaGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTtgt < 1:7604858/68‑1 (MQ=255) aGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTgc < 1:1276587/68‑1 (MQ=255) gCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTgc > 1:26139056/1‑67 (MQ=255) gCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTgc > 1:2035235/1‑67 (MQ=255) tctggtggAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTgc < 1:5124‑M1/58‑1 (MQ=255) cAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCt < 1:9720420/68‑1 (MQ=255) cAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCt < 1:12272605/68‑1 (MQ=255) cAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCt < 1:3415183/68‑1 (MQ=255) ggtggAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTgg < 1:3673778‑M1/63‑1 (MQ=255) gCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTgg > 1:11223666/1‑67 (MQ=255) gCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTgg > 1:16169804/1‑67 (MQ=255) ccAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTgg < 1:21129603/66‑1 (MQ=255) ccAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTgg < 1:28536028/66‑1 (MQ=255) ccAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTgg < 1:13959706/66‑1 (MQ=255) ccAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGAc > 1:11407122/1‑68 (MQ=255) ccAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGAc > 1:17781015/1‑68 (MQ=255) AACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGAt > 1:8382060‑M1/1‑68 (MQ=255) | ATTGATATCGCCGATAACAAATTTTTCAACGGCGAAACATCACCGCTCTTTTCGCAAAGCCAGGCCAAACTGGCGCGCCAGTTCCACCAGAAAATAGCTGGTTATCGCCCAACACCGCTTTGTGCGCTGGACGAT > CP009273/3000890‑3001024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |