| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 363 (0.940) | 15 (0.050) | 8/90 | NT | 5.4% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 233 (0.750) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 532 total aligned reads displayed.
ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 | tgacgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgg > 1:31953819‑M1/68‑68 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:10687491/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:11046746/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:8612765/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:8158903/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:31010644/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:29419605/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:5261170/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:14193720/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:19534267/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:4545651/68‑1 (MQ=255) acgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg < 1:11495354‑M1/3‑1 (MQ=255) acgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg < 1:7743042‑M1/3‑1 (MQ=255) acgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg < 1:2695491‑M1/3‑1 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:31620569‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:16388115‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGt < 1:24937362‑M1/4‑1 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:27833335‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:18345095‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:28111853‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:3249894‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:4940231‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:7650501‑M1/64‑68 (MQ=255) cgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGttt < 1:8904499‑M1/6‑1 (MQ=255) gtaaTATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:12388188/65‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCTACCGGGAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:3999803/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:27673909/67‑1 (MQ=255) gAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGc > 1:22204972/1‑68 (MQ=255) tgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGc > 1:29652666‑M1/60‑67 (MQ=255) tgaatggcgttaccggcctggtcgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGc > 1:23680596‑M1/60‑67 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:6928683/68‑1 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:22468848/1‑68 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:29835837‑M1/10‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:29080693/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:9751165/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:24707045/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:25225526/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:17555254/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:17016730/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:12123375/68‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:27123157/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:9337631/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:6642841/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:5445482/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:5608682/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:14763194/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:1892258/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTATGCAGAGCTGt < 1:10034852/67‑1 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:3638583/1‑68 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:26339343/1‑68 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:28454992/1‑68 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:10502149/1‑68 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:24468811/1‑66 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:1176816/1‑66 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:27506692/68‑1 (MQ=255) cTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCt < 1:18531629/68‑1 (MQ=255) cTGACCAAACGGCAAAAAGAGCGGCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCt < 1:20110183/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:18054377/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGATTGCAGAGCTGTTAAGCAGTCTg < 1:20651305/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGGCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:12836290/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:26179605/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:5974399/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:24154299/68‑1 (MQ=255) cGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcccc > 1:30679777/1‑68 (MQ=255) cGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcccc > 1:230002/1‑68 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgagt < 1:21427187/68‑2 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:13717829/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:13122573/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:7510376/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:12030260/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:424571/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:8459490/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:3771566/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:21839186/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:30343963/68‑1 (MQ=255) agcatttcaatcgcttttaatctccgGGGTTTGCAGAGCTGTTAATCAGTCTGCAAACCCCGGAGAtt < 1:6240751‑M1/42‑1 (MQ=255) gcatttcaatcgcttttaatctccgGGGTTTGCTGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTa < 1:10400984‑M1/43‑1 (MQ=255) gagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaa > 1:19873941/1‑68 (MQ=255) tCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg > 1:20465900/1‑68 (MQ=255) cTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCg < 1:30136295/67‑1 (MQ=255) aGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGaa > 1:2605379/1‑68 (MQ=255) ggAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:16531205/1‑67 (MQ=255) ggAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATg < 1:15810349/68‑1 (MQ=255) gAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:20807996/1‑66 (MQ=255) gAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt > 1:22690953/1‑66 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:19279317/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:23360430/67‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCt < 1:28946675/67‑1 (MQ=255) aGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTc < 1:7224901/68‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:28690040‑M1/62‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:585548‑M1/62‑1 (MQ=255) gcgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt > 1:15091972/1‑68 (MQ=255) ggcAGGGTTTGCAGAGCTGTTATGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:17753791/66‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:14565399/67‑1 (MQ=255) gcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGa > 1:26511771/1‑68 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:20205368/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:16138027/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:26646856/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:21965812/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:15507603/67‑1 (MQ=255) | ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |