| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3820789 | NA (NA) | 3 (0.010) | 3/98 | NT | NA | intergenic (+138/+31) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter |
| ? | CP009273 | = 3820811 | NA (NA) | intergenic (+160/+9) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter | |||||
Only 100 of 504 total aligned reads displayed.
AAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTA > CP009273/3820722‑3820856 | aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:3458783/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:5072246/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:22670544/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:23263802/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:11933883/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:9350556/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:2608810/1‑67 (MQ=255) aaTTCAATAAATTATGAATCAATACGCAGCCTTGATAAGCGAAGCGTATCAGGCATTTGTCTttgtt > 1:6603103/1‑67 (MQ=255) ttCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTgcg < 1:11048084‑M1/68‑4 (MQ=255) tCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTgcg > 1:28085638‑M1/1‑64 (MQ=255) aaaTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCa < 1:20195679/68‑1 (MQ=255) aaaTTATGAATCAATACGCAGGCTTGATAAGCGAAGAGTATCAGGCATTTGTCTTTGTTGCGGCGGCa < 1:14325303/68‑1 (MQ=255) aTTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt < 1:28574924/68‑1 (MQ=255) ttATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt > 1:11813069/1‑67 (MQ=255) ttATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACt > 1:16567442/1‑67 (MQ=255) aaTCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACC < 1:12178475‑M2/68‑1 (MQ=255) cAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCC > 1:30680820‑M2/1‑68 (MQ=255) cAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCC > 1:6382441‑M2/1‑68 (MQ=255) aTACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGC > 1:13140131‑M2/1‑68 (MQ=255) tACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt < 1:16037423/68‑1 (MQ=255) tACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:2575168/1‑68 (MQ=255) tACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt < 1:8258445/68‑1 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCt > 1:7746208/1‑67 (MQ=255) aCGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCaa > 1:21175286‑M2/1‑66 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:14698108/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:15806052/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:16533319/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:20796077/1‑68 (MQ=255) gCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:17915830/1‑68 (MQ=255) cAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCa > 1:31666899/1‑67 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCAtag > 1:23986348/1‑66 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg > 1:10022159/1‑68 (MQ=255) ggCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg > 1:13377635/1‑68 (MQ=255) gCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCgg > 1:15698064/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCAta < 1:30911534/65‑2 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg < 1:13831627/66‑1 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:1287220/1‑68 (MQ=255) cTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGt > 1:14610176/1‑68 (MQ=255) tGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCg < 1:10631297/64‑1 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:18444310/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:24735772/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:27516116/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:23531428/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:2186445/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:2030997/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:25153386/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:17201060/1‑68 (MQ=255) tAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAAcc > 1:3797257/1‑68 (MQ=255) agcgaagcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCg > 1:3270476/1‑67 (MQ=255) gcgTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCaaaaa > 1:30242087/1‑68 (MQ=255) gTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCaacaaagacaaatgcctgatacg > 1:4048526‑M2/1‑44 (MQ=255) gTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATc > 1:10817141/1‑68 (MQ=255) tCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGc > 1:16860517/1‑68 (MQ=255) tCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGc > 1:24852353/1‑68 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:18951104/1‑67 (MQ=255) aGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCa > 1:9210012/1‑67 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:3118334/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:10330739/1‑68 (MQ=255) gCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:19104170/1‑68 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAAc < 1:26565373/66‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:16956406/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa < 1:15538410/67‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:30422851/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa < 1:29688123/67‑1 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACa > 1:27771611/1‑67 (MQ=255) cATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCCGTTACCCGGCCAAAATCGGCAACa > 1:6881815/1‑67 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:28387251/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:25546406/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:8697082/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:26659058/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:31986279/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:19622023/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:313460/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:13674402/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:24318284/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:7304829/67‑1 (MQ=255) aTTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACAt < 1:14017968/67‑1 (MQ=255) ttGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCaa < 1:19860935/68‑1 (MQ=255) gTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:5298903/1‑68 (MQ=255) gTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:21090102/1‑68 (MQ=255) gTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:7153094/1‑68 (MQ=255) tCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAAt > 1:5414493/1‑67 (MQ=255) tttGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa < 1:9559909/68‑1 (MQ=255) tttGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa < 1:24141559/68‑1 (MQ=255) ttgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACa > 1:5747302/1‑67 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:4756965/68‑1 (MQ=255) tgttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAAc < 1:22891163/68‑1 (MQ=255) gttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACt < 1:29478858/68‑1 (MQ=255) gttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACt > 1:17546094/1‑68 (MQ=255) ttgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt > 1:23016011/1‑68 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:15058303/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:14840022/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:21373854/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:29106026/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:27043137/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:24892855/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:12663209/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:11637845/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACtt < 1:25956479/67‑1 (MQ=255) tgCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGAAACATCAAATACAACtt < 1:19287368/67‑1 (MQ=255) | AAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTATCAGGCATTTGTCTTTGTTGCGGCGGCACTTCTACCGCCGCTTCATCGGTTAACCGGCAAAAATCGGCAACATCAAATACAACTTA > CP009273/3820722‑3820856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |