| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 619586 | 247 (0.640) | 11 (0.030) | 6/94 | NT | 5.1% | coding (381/957 nt) | fepB | iron‑enterobactin transporter subunit |
| ? | CP009273 | = 619639 | 202 (0.630) | coding (328/957 nt) | fepB | iron‑enterobactin transporter subunit | |||||
Only 100 of 294 total aligned reads displayed.
GTGCCAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTG > CP009273/619573‑619705 | tGCCAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCt < 1:25781529‑M2/67‑2 (MQ=255) tccAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGc < 1:24466825/64‑1 (MQ=255) gCCAGCGCCGAATCCCCGCCTGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGc < 1:29368748/65‑1 (MQ=255) gCCAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGc < 1:28126526/65‑1 (MQ=255) gCCAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttc < 1:6006223‑M2/68‑4 (MQ=255) gCCAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttc < 1:14158987‑M2/68‑4 (MQ=255) ccAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAATTCAGATCCGGCATTTGCGCGGCAACGGCttcg < 1:30498196‑M2/68‑5 (MQ=255) ccAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcg < 1:31011222‑M2/68‑5 (MQ=255) ccAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcg < 1:24674022‑M2/68‑5 (MQ=255) ccAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcg < 1:31433271‑M2/68‑5 (MQ=255) ccAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcg < 1:10449762‑M2/68‑5 (MQ=255) cgcCGACTCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:15414102‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:2980225‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:20211462‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:17995156‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:5444038‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:23074902‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:28765510‑M2/66‑7 (MQ=255) cgcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc < 1:26745200‑M2/66‑7 (MQ=255) gcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggcg > 1:20439383‑M2/1‑59 (MQ=255) gcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc > 1:7476314‑M2/1‑59 (MQ=255) gcCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggc > 1:8566465‑M2/1‑59 (MQ=255) aTCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGtt < 1:6746015/68‑1 (MQ=255) aTCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGtt < 1:20792306/68‑1 (MQ=255) aTCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGt < 1:27621213/67‑1 (MQ=255) aTCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGt < 1:9586581/67‑1 (MQ=255) tCCCCGCCGGTTGCGCTAATTAAACTCAGATCCGGCATTTGCGCGGCAACGGCttcggcgctggcact > 1:10057936‑M2/1‑53 (MQ=255) tCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggcgctggcact > 1:15158004‑M2/1‑53 (MQ=255) tCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggcgctggcact > 1:22792599‑M2/1‑53 (MQ=255) tCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTc > 1:7027305/1‑68 (MQ=255) ccccGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCttcggcgctggcactg > 1:1196057‑M2/1‑52 (MQ=255) ccccGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTc > 1:21201056/1‑67 (MQ=255) ccccGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCg < 1:31874170/68‑1 (MQ=255) ccccGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCg < 1:5153770/68‑1 (MQ=255) ccccGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCg < 1:21719789/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:26144674/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:1129198/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:26790202/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:8976126/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:8029875/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:24184412/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:29124590/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:29620280/68‑1 (MQ=255) ccgccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:30202512/68‑1 (MQ=255) ccgccgGTTACGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGcc < 1:13432910/68‑1 (MQ=255) gccgGTTGCGCTAATTAAAATCAGATCCGGCTTTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGccta < 1:15886103/68‑3 (MQ=255) gccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGa < 1:14056160/68‑1 (MQ=255) ccgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat > 1:16625448/1‑68 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTGGGCGCTCGGTTCGCCGat < 1:20035773/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:28647170/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:29605124/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:3760236/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:10073994/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:11535626/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:18540549/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:17440938/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:17133122/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:23887403/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:14910252/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:24997776/67‑1 (MQ=255) cgGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGat < 1:13220731/67‑1 (MQ=255) ggTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGatat > 1:16144125/1‑68 (MQ=255) tGCGCTAATTAAATTCACATCCGGCATTTGCGCGGCAACGCCttcggcgctggcactgtatgatcagc > 1:2840164‑M2/1‑42 (MQ=255) tGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCtgcggcgctggcactgtatgatcagc > 1:20752541‑M2/1‑42 (MQ=255) tGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATaga > 1:22472948/1‑68 (MQ=255) cTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCg > 1:1702198/1‑68 (MQ=255) tAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGt < 1:14260747/68‑1 (MQ=255) tAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGt < 1:4973539/68‑1 (MQ=255) tAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGt < 1:3058993/68‑1 (MQ=255) ttAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGc > 1:833676/1‑68 (MQ=255) tAAACTCTGTTCCGGCATTTGGGCGGCAACGGCTTCGGCGCTCGGGTCGCCGATATAGAGCCGTTGCa < 1:25876260/68‑1 (MQ=255) tAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCa < 1:12320329/68‑1 (MQ=255) tAAAATCAGATCCGGCATTTGCGCGGCAACGGCGTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCa < 1:24387084/68‑1 (MQ=255) aaaaTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAg < 1:27822259/68‑1 (MQ=255) aaTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGtt < 1:30767617/68‑1 (MQ=255) atcagatcagGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:6109471/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGTCGATATAGAGCCGTTGCAGttt > 1:4009723/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:19479654/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:17622024/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:12740515/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:21959869/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:22169090/1‑68 (MQ=255) aTCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:18893756/1‑68 (MQ=255) tCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGttt > 1:27316688/1‑67 (MQ=255) tCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGt > 1:4839494/1‑66 (MQ=255) tCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTc < 1:1973889/68‑1 (MQ=255) cGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCtt < 1:23543797/68‑1 (MQ=255) cATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTc > 1:323333/1‑67 (MQ=255) ttGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCa < 1:3709066/68‑1 (MQ=255) tGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCAc < 1:9697314/68‑1 (MQ=255) gcgGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCtt < 1:3528058/68‑1 (MQ=255) ctgCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCtt > 1:25323775/3‑67 (MQ=255) cAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCt < 1:13769635/67‑1 (MQ=255) cAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCt < 1:31568642/67‑1 (MQ=255) cAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCt < 1:9108348/67‑1 (MQ=255) aaCGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTcc > 1:26417509/1‑68 (MQ=255) aCGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTcc > 1:15701118/1‑67 (MQ=255) ggCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTcc > 1:2821413/1‑65 (MQ=255) cTTCGGCGCTCGGTTCGCCGATATAGCGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTg > 1:6404750/1‑67 (MQ=255) cTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTg > 1:4194715/1‑67 (MQ=255) | GTGCCAGCGCCGAATCCCCGCCGGTTGCGCTAATTAAAATCAGATCCGGCATTTGCGCGGCAACGGCTTCGGCGCTCGGTTCGCCGATATAGAGCCGTTGCAGTTTGCGTTCTTTCGCCACCTTGCTCCACTG > CP009273/619573‑619705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |