| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2590222 = | 288 (0.750) | 13 (0.040) | 7/90 | NT | 5.6% | intergenic (‑126/+42) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| ? | CP009273 | 2590249 = | 207 (0.670) | intergenic (‑153/+15) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase | |||||
Only 100 of 359 total aligned reads displayed.
GAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590182‑2590315 | aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:22744747/67‑1 (MQ=255) aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:16110345/67‑1 (MQ=255) aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:15265388/67‑1 (MQ=255) aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:21808804/67‑1 (MQ=255) aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:14006175/67‑1 (MQ=255) aggaATGAGCGCTCAATTCATATATTCCGAGATCGGTTGGCTGGCCGTGCCAGCGGCACTGCAAgat < 1:2336884/67‑1 (MQ=255) aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGattatg > 1:21495928/1‑68 (MQ=255) tgggtgtacagctggactgatttttctgttcatcatcttgccgtgcagctggcacggcaagatgatga < 1:17485367‑M2/6‑1 (MQ=255) gAGCGTTCAATGCAAATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATTAAc < 1:20000735/68‑1 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:31466456/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:13538492/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAAAAg > 1:27009728/1‑68 (MQ=255) cGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGa > 1:13287024/1‑68 (MQ=255) cGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGa > 1:1544298/1‑68 (MQ=255) gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:11692339/66‑1 (MQ=255) gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:3457918/66‑1 (MQ=255) gTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg < 1:9258439/66‑1 (MQ=255) acagctggactgatttttctgttcatcaTCTTGCCGTGGCAGCTGCACGGCATGATGATGAAGAGaaa < 1:25002041‑M1/40‑1 (MQ=255) acagctggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGCACGGCAAGCTGATGATCAGaaa < 1:14919033‑M1/40‑1 (MQ=255) tCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCCCGGCAAGATGATGAACAGaaaa > 1:28260409/1‑68 (MQ=255) tCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAACTTCAAGGCAAAATGATTAAAAGaaaa > 1:3179980/1‑68 (MQ=255) cAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaaa < 1:4468599/68‑1 (MQ=255) aaTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAAt > 1:26119559/1‑68 (MQ=255) aTGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATc > 1:8513210/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:29740616/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:30539510/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:15823758/1‑68 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAg > 1:26490075/1‑68 (MQ=255) atatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGt < 1:30127884/67‑1 (MQ=255) tatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTcc > 1:18380673/1‑68 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:23786766/68‑1 (MQ=255) tatTCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:22588675/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:19487366/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:14600150/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:8888431/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:13199794/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:13162372/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCACCGGCACGGCAAGATGATGAACAGCAAAATCAGTGCa > 1:1712819/1‑67 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:13660265/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:22474908/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:30692146/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:12773141/68‑1 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:24395601/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTTCCAGCTGCACGCCAAGATGATGAACAGAAAAATCAGTCCa > 1:16512047/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:7237886/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:19369601/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:18999211/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACACAAAAATCAGTGCa > 1:17991662/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCAAGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:4004566/1‑65 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:31150553/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:4774008/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:5555315/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:6000988/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:113932/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:10030361/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTg < 1:23211306/68‑1 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTg < 1:24169531/68‑1 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAAAAAGTCCa > 1:8201874/1‑64 (MQ=255) tCCGAGAGCGGTTGTCGTGCCCTGCCAGCTGGACGGGAAGATGATGAAAATAAAAATAAGTCCa > 1:9773187/1‑64 (MQ=255) tttctcttcatcatcttgccgtgcagctgccacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGt < 1:6406976‑M2/28‑1 (MQ=255) ttcctgtccatcatcttgccgggcagctgccacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGt < 1:29504307‑M2/28‑1 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCGGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt < 1:7453552/68‑1 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt < 1:6856623/68‑1 (MQ=255) cGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt > 1:15723295/1‑67 (MQ=255) tctgatcatcatcttgccgtgcagctggcacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTac < 1:10183689‑M2/30‑1 (MQ=255) agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:16879723/1‑67 (MQ=255) agagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:12180602/1‑67 (MQ=255) agagCGGTTGTCTTGCCGTGCCACCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTac > 1:5174270/1‑67 (MQ=255) agagCGGTTGTCTTGCCCTGCCCGCAGCACGGCAAGATGATGAAAAGAAAAATCAGTCCAGCTGTac > 1:20080357/1‑67 (MQ=38) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:4192323/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAAACAGTCCAGCTGTacac > 1:29371070/1‑67 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACTGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:18614996/67‑1 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:6539981/67‑1 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:20664904/67‑1 (MQ=255) ggTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAccc < 1:25642900/66‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCCGTCCAGCTGTACACCCCGGCggcgggcg < 1:21964340‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:12846513‑M1/67‑1 (MQ=255) GCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACg > 1:7640644‑M1/1‑67 (MQ=255) GCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACg < 1:10087717‑M1/67‑1 (MQ=255) CCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACg < 1:10666208‑M1/66‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:27597866/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:4515284/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:20967410/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:30736139/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:9457232/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:10922489/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:12496759/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCt < 1:22919996/68‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCt < 1:1789265/68‑1 (MQ=255) cTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa > 1:21740925/1‑68 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCtt < 1:14545999/65‑1 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCa < 1:25524475/67‑1 (MQ=255) gcacggcaagaTGATGAACAGAAAAATCAGTCCCGCTGTACACCCAGGCGGCGGGCGACGGCTTCATa > 1:2996520‑M2/12‑68 (MQ=255) acggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAgg < 1:6237852‑M2/59‑1 (MQ=255) acggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAgg < 1:31916054‑M2/59‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:22132164‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:28587868‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:27652495‑M2/60‑1 (MQ=255) gcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCt > 1:7293057‑M2/7‑67 (MQ=255) agaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGa < 1:27958591‑M2/65‑1 (MQ=255) | GAGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590182‑2590315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |