| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2845465 = | 227 (0.590) | 18 (0.050) | 10/96 | NT | 6.5% | coding (243/273 nt) | hypC | hydrogenase maturation protein |
| ? | CP009273 | 2845525 = | 320 (0.970) | coding (31/1122 nt) | hypD | hydrogenase maturation protein | |||||
Only 100 of 463 total aligned reads displayed.
CGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA > CP009273/2845458‑2845590 | cGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCgg < 1:26214611/68‑1 (MQ=255)cGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCgg < 1:2647295/68‑1 (MQ=255) ggATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGa < 1:11009007/68‑1 (MQ=255) ggATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGa < 1:30107492/68‑1 (MQ=255) ggATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGa < 1:30718538/68‑1 (MQ=255) tgtcggcgcgcgatattcatcaacaaaacgcattatttttcctcgccatacaacagcgcgccgGAACa < 1:1660472‑M2/5‑1 (MQ=255) tGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACa > 1:22410215/1‑68 (MQ=255) tccggcgcgcgatattcatcaacaaaacgcattatttttcctcgccatacaacagcgcgccgGAACAg < 1:18721416‑M2/6‑1 (MQ=255) gccggcgcgcgatattcatcaacaaaacgcattatttttcctcgccatacaacagcgcgccgGAACAg < 1:11180578‑M2/6‑1 (MQ=255) gTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAg < 1:12030033/68‑1 (MQ=255) gTCGGCGCGCGGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAg < 1:20544218/68‑1 (MQ=255) cCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAgg < 1:6361656‑M1/67‑1 (MQ=255) CGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGt > 1:26822050‑M1/1‑68 (MQ=255) CGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGt > 1:25666836‑M1/1‑68 (MQ=255) CGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGt > 1:15553999‑M1/1‑68 (MQ=255) gGCGCTGTTGTAAGGCGAGGAAAAATAATGCGGTTTGTTCATGAATATCGCGCGCCGGAACAGGTgaa < 1:1591265‑M1/67‑2 (MQ=255) CGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGa > 1:20194644‑M1/1‑67 (MQ=255) CGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt < 1:17950618‑M1/68‑1 (MQ=255) CGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt < 1:29852354‑M1/68‑1 (MQ=255) CGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt < 1:8965839‑M1/68‑1 (MQ=255) CGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt < 1:9813601‑M1/68‑1 (MQ=255) CGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt < 1:22965751‑M1/68‑1 (MQ=255) GCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGAt < 1:3497312‑M1/67‑1 (MQ=255) tgttgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAg < 1:19057834/67‑1 (MQ=255) tgttgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAg < 1:6022542/67‑1 (MQ=255) tgttgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAg < 1:28320155/67‑1 (MQ=255) tgttgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGt < 1:28810397/68‑1 (MQ=255) tggtgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAg < 1:18343199/64‑1 (MQ=255) gatattcatcaacaaaacgcattatttttcctcgccatacaccagcgcgccgGAACAGGTGATGCAg < 1:3595301‑M2/15‑1 (MQ=255) gttgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGtt > 1:4968785/1‑68 (MQ=255) gttgtATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGtt > 1:24745079/1‑68 (MQ=255) ttcatcaacaaaacgcattatttttcctcgccatacaacagcgcgccgGAACAGGTGATGCAGTTAAt < 1:14701899‑M2/20‑1 (MQ=255) gtATGGCGAGGAAAAATAATGCGTTTTGTTGATTAATATCGCGCGCCGGAACAGGTGATGCAGTTAAt < 1:21507010/68‑1 (MQ=255) aTGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAAtt < 1:5366727/67‑1 (MQ=255) aTGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTg > 1:16399554/1‑68 (MQ=255) aTGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTg > 1:20025624/1‑68 (MQ=255) aTGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTg > 1:25450514/1‑68 (MQ=255) aTGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCCCGCATGAAAATGTGATGAAGTTAATTg > 1:11575841/1‑68 (MQ=255) tGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa < 1:4571049/68‑1 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGATCAGGTGATGCAGTTAATTGa > 1:7863104/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:24947397/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:5791241/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:7518393/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:717747/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:24360651/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:10396461/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:14580048/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:10822533/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:18960687/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:19367498/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:21366405/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:13933684/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:20873531/1‑67 (MQ=255) ggCGAGGAAAAATAATGCGTTTTGTTGATGAAAATCGCGCGCCGGAACAGGTGATGCAGTTAATTGa > 1:2522071/1‑67 (MQ=255) gCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAg < 1:4730677/49‑1 (MQ=255) gCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGc > 1:18477815/1‑68 (MQ=255) cGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGc < 1:1259556/67‑1 (MQ=255) cGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGc < 1:1742494/67‑1 (MQ=255) gAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCa < 1:10002833/67‑1 (MQ=255) aacgcattatttttcctcgccatacaacagcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTgc < 1:5120055‑M2/31‑1 (MQ=255) aataatGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGcgcg > 1:8404605/1‑68 (MQ=255) aatGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAAc > 1:9103223/1‑68 (MQ=255) tGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGt < 1:11502742/68‑1 (MQ=255) tGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGt < 1:9181845/68‑1 (MQ=255) tGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGt < 1:31524339/68‑1 (MQ=255) gTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGc < 1:618720/67‑1 (MQ=255) gTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCt > 1:27804321/1‑68 (MQ=255) gTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCt < 1:5531324/68‑1 (MQ=255) gTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCt < 1:1969408/68‑1 (MQ=255) gTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCt < 1:3818672/68‑1 (MQ=255) gttgATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTcaca < 1:25923862/68‑1 (MQ=255) tgatgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTcaca > 1:18099411/1‑66 (MQ=255) tgatgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAt < 1:6561851/67‑1 (MQ=255) gatgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtct < 1:23674764/68‑1 (MQ=255) gatgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtct < 1:16862631/68‑1 (MQ=255) gatgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGCGCTTCACAtct < 1:14104047/68‑1 (MQ=255) atgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtct < 1:16084458/67‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:14940367/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:6649404/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:23958547/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:13074509/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:29149466/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:13742731/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:10751848/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:14382200/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctct < 1:26685763/68‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctc > 1:30506849/1‑67 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACAtctc < 1:8260278/67‑1 (MQ=255) tgaATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGCGCTTCACAtctct < 1:23274739/68‑1 (MQ=255) aaTATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATctctct > 1:21263106/1‑68 (MQ=255) aaTATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATctctct > 1:27542103/1‑68 (MQ=255) aaTATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATctctct > 1:1221671/1‑68 (MQ=255) atatCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATctctct < 1:27310474/67‑1 (MQ=255) atatCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCtt > 1:31973658/1‑68 (MQ=255) atCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTac > 1:22069814/1‑68 (MQ=255) atCGCGCGCCGGAACAGGTCATGCAGTTAATTGAGCATCTGCGCGAACGTGCATCACATCTCTCTTac > 1:30328738/1‑68 (MQ=255) cgcgcgCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCAAATCTCTATTaca > 1:12755466/1‑67 (MQ=255) gcgcgccgGAACATGGGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACAcc < 1:3107976‑M2/60‑1 (MQ=255) gcgcgccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACAcc < 1:4213709‑M2/60‑1 (MQ=255) gccgGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACAccgccg < 1:21734514‑M2/64‑1 (MQ=255) | CGGATGTCGGCGCGCTGTTGTATGGCGAGGAAAAATAATGCGTTTTGTTGATGAATATCGCGCGCCGGAACAGGTGATGCAGTTAATTGAGCATCTGCGCGAACGTGCTTCACATCTCTCTTACACCGCCGAA > CP009273/2845458‑2845590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |