BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3921522	619 (1.300)	44 (0.100)	6/100	NT	7.2%	coding (1442/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein
*	?	CP009273	= 3921534	574 (1.350)	44 (0.100)	6/100	NT	7.2%	coding (1430/1452 nt)	viaA	stimulator of RavA ATPase activity; von Willebrand factor domain protein

Only 100 of 229 total aligned reads displayed.

GTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3921451‑3921522

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  CP009273/3921534‑3921468

 TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:964901/1‑68

 TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:7329127/1‑68

 TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:25648453/1‑68

 TTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:16635765/1‑68

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:1590925/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:24033900/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:16788681/1‑67

  TCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCC                                                                        >  1:4037554/1‑67

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:14124706/68‑1

   CAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGC                                                                      <  1:2093272/68‑1

    AGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC                                                                     >  1:17051242/1‑68

       GTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCCTGC                                                                  <  1:2982366/68‑1

                                               TCTGCTGTAATAATTTATCGCCGCCTGGTCAGACGCTGGCGGGGAGAAATTATTACAGCAGAGAAGG                           >  1:34013700/1‑67

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGGCGCTGGCGGCGATAATTTATTACAGCAGAGGAGGG                          >  1:22457327/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAATTTATTACAGCAGAGCAGGG                          >  1:8685105/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:17710659/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:19190395/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:16450438/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:15137738/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:30190753/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:30672922/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:36780931/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGG                          >  1:5650433/1‑68

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGG                           >  1:596103/1‑67

                                               TCTGCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGG                           >  1:19235901/1‑67

                                                  GCTGTAATAATTTATCGCCGCCTGGTAAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:28329064/1‑67

                                                  GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATTAATTATTACAGCAGCGCAGGGAC                        >  1:34599495/1‑67

                                                  GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:9300995/1‑67

                                                  GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:20627892/1‑67

                                                  GCTGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGAC                        >  1:3537407/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGCCGCTGGCGGCGATAATTTTTTACAGCAGAGAAGGGACGC                      >  1:34045366/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAATTTATTACAGCAGAGAAGGGACGC                      >  1:21171913/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTTTTACAGCAGAGAAGGGACGC                      >  1:32800197/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:26630916/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:34251964/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:9084317/1‑67

                                                    TGTAATAATTTATCGCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGC                      >  1:18775456/1‑67

                                                                 aaCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGC         <  1:14337677/65‑1

                                                                  GCCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCA        >  1:13481961/1‑67

                                                                   CCGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCCAACAGCA        >  1:7583156/1‑66

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGC      <  1:10757106/67‑1

                                                                    CGCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAG       <  1:3007012/66‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:28712339/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:29089739/1‑68

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:24549101/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:38346592/1‑68

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    <  1:10677463/68‑1

                                                                     GCCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCGCTCGCGAACAGCAGCTG    <  1:1293041/68‑1

                                                                      CCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:35055182/1‑67

                                                                      CCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:32702723/1‑67

                                                                      CCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:25245965/1‑67

                                                                      CCTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTG    >  1:15544338/1‑67

                                                                       CTGCTCAGTCGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:17914801/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGCGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:4423132/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:3863961/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:23415437/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:35550140/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:35890739/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:36143722/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:36493644/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2146084/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:37601856/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:37959719/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:22705640/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:34752941/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:21576118/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:5320097/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:8308610/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:1183055/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:7037406/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:11166518/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:8177473/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:22065547/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:3199265/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:1005766/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27946451/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:27016876/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:29758070/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:15085761/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:26383190/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:14931663/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:2610251/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:31330817/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:31843393/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:23558815/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:32214996/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:18980644/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:33314320/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:33362826/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:13913123/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:24771058/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:20539945/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  1:15715952/68‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:19600474/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:7432254/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:12650141/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:4614317/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:22994079/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGG   <  1:34432892/67‑1

                                                                       CTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCAGGC  <  1:28414841/68‑1

GTTCAGTGTGGAGTATGGCCAGCTGCTGTTCGCGAGAGCGTCCCTTCTCTGCTGTAATAATTTATCGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3921451‑3921522

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgccTGCTCAGACGCTGGCGGCGATAAATTATTACAGCAGAGAAGGGACGCTCTCGCGAACAGCAGCTGGC  <  CP009273/3921534‑3921468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.