| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 699831 = | 380 (0.800) | 41 (0.100) | 9/96 | NT | 12.0% | coding (432/1947 nt) | nagE | fused N‑acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components |
| ? | CP009273 | 699861 = | 276 (0.680) | coding (462/1947 nt) | nagE | fused N‑acetyl glucosamine specific PTS enzyme: IIC, IIB, and IIA components | |||||
Only 100 of 121 total aligned reads displayed.
AAACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/699901‑699831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgccGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATC > CP009273/699861‑699927 AAACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGCCGTAACCAAAAATGGCC > 1:35057767/1‑68AAACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCC > 1:12929735/1‑68AAACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCC > 1:6695752/1‑68 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:2248586/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:20555434/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:20784717/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:36335133/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:3882468/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:4957223/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:21501390/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:21722190/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:6090358/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:33969406/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:30165126/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:15295870/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:27129436/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:11650732/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:958320/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:15294612/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:866111/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG < 1:25615821/68‑1 AACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGC < 1:9816301/66‑1 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGC < 1:35956473/68‑1 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGC < 1:8006092/68‑1 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG > 1:7128506/1‑67 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG > 1:18575870/1‑67 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG > 1:26376173/1‑67 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG > 1:19122354/1‑67 ACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCG > 1:10734706/1‑67 ccATCCACTCGCCGCCTGCATGGATAGCGGGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:29944698/66‑1 CGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:34693361/68‑1 CGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:38943601/68‑1 CGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:10982773/68‑1 CGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:8062284/68‑1 CGATCCACTCGCCGCCTGCATGGATAGCGGGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:5016170/68‑1 CGATCCACTCGCCGCCTGCAAGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC < 1:24847385/68‑1 TCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGT < 1:24658943/68‑1 TCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGG < 1:14059138/67‑1 CGCCGCCTGCATGCATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCA < 1:34975197/68‑1 GCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCAC < 1:10825681/68‑1 GCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCAC < 1:29911521/68‑1 GCCGCCTGCATGGATAGCGCGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCAC < 1:24296796/68‑1 GCCGCCTGCATGCATAGCGGGCTGTACCGGCGGCCAGACGTAACCAAAACTGGCCGCCGGTACAGCAC < 1:18168000/68‑1 GCCGCCTCCAGGCATAGCGGGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCAC < 1:95181/68‑1 CGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACG < 1:2836408/67‑1 CGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACG < 1:1632059/67‑1 GCCTGCATGGCTAGCGGGCTGTACCGGCGGCCAGACGTAACCAAACATGGCCGCCGGTACAGCACGCT < 1:1641208/68‑1 GCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCT < 1:7259386/68‑1 GCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCT < 1:27500107/68‑1 GCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCT < 1:35901400/68‑1 GCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCT < 1:21148601/68‑1 GCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGCCCGCCGGTACAGCACGCT < 1:7320966/68‑1 GCCTGCATGGAACGCGCGCTGTACCGGCGGCCAGACGTAACCAAAAATGCCCGCCGGTACAGCACGCT < 1:6112563/68‑1 CCTGCATGGAAAGCGGGCTGTACCGGCGGCCAGACGTACCCAAAAAGGGCCGCCGGTACAGCACGCTA < 1:23675378/68‑1 CCTGCATGGAAACCGTGCTGAACCGGCGGCCAGACGTAACCAAAAATGGTCGCCGGTACAGCACGCTA < 1:20257147/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTAT < 1:12082/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTAT < 1:24856753/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTAT < 1:7452929/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTAT < 1:20049401/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTAT < 1:8097953/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTAT < 1:33281728/68‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTA < 1:16844034/67‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTA < 1:6695526/67‑1 CTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTA < 1:15564312/67‑1 TGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTATC < 1:31676317/68‑1 GCATGGATCGCGTGCGGTAGCGGGGGCCTGACGTAACCAAAAATGCCCGCCGGTACAGCACGCTATC < 1:3703582/67‑1 ATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTATCCA < 1:29775448/67‑1 ATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTATCCA < 1:18592472/67‑1 CGGCCAGACGTAACCAAAAATGGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTT > 1:106374/1‑68 GGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCC < 1:6975654/68‑1 GGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCC < 1:8533549/68‑1 GGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCC < 1:30974677/68‑1 GGCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCC < 1:12519409/68‑1 GCCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCG > 1:18401876/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:15301403/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:15072961/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:18081950/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:19061042/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:10557991/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:36717099/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:33240436/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:2206892/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG > 1:35650069/1‑68 CCGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCG < 1:4418974/67‑1 CGCCGGTATCGCTCGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCcg < 1:28592808/67‑3 CGCCGGTACAGCAGTCTATCCATTCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG < 1:875311/67‑1 CGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGT < 1:27217013/68‑1 CGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG < 1:21813405/67‑1 CGCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGG < 1:31322510/67‑1 GCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTA < 1:16705475/68‑1 GCCGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTA < 1:31893747/68‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATC < 1:34064056/68‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATC < 1:31890010/68‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATC < 1:23198785/68‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTAT < 1:6861377/67‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTAT < 1:22742192/67‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTAT < 1:16940842/67‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTAT < 1:19102984/67‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTAT < 1:17852423/67‑1 CGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGGTTCTGCGGGCGCGCTGGGTTCCGGTAT < 1:4337098/67‑1 AAACGATCCACTCGCCGCCTGCATGGATAGCGTGCTGTACCGGCGGCCAGACGTAACCAAAAATGGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/699901‑699831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgccGGTACAGCACGCTATCCATGCAGGCGGCGAGTGGATCGTTTCTGCGGGCGCGCTGGGTTCCGGTATC > CP009273/699861‑699927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |