| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1823129 | 213 (0.450) | 17 (0.040) | 9/94 | NT | 7.3% | coding (863/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase |
| ? | CP009273 | = 1823150 | 254 (0.640) | coding (842/1479 nt) | astD | succinylglutamic semialdehyde dehydrogenase | |||||
TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1823054‑1823129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgcccGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCA < CP009273/1823150‑1823084 TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCC < 1:3172352/68‑1TCGGCATCCAAGGTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCC < 1:30390936/68‑1 CATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGC < 1:24392008/68‑1 ATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGC > 1:29441369/1‑67 ATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGC > 1:22749535/1‑67 TCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCG > 1:15372536/1‑67 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCACCCAGCCGAGCAAGAAACGCATCGCCCTGCGC > 1:12197879/1‑67 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC < 1:23634321/68‑1 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC < 1:15654819/68‑1 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC < 1:35370907/68‑1 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGC > 1:15658454/1‑67 CCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGC > 1:4179081/1‑67 CCCAGTTGCCCGGCGTAAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC < 1:10139972/68‑1 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:26656341/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:25402240/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:24947098/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:4610663/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:6203304/1‑67 CCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCC > 1:6382200/1‑67 AGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCG > 1:38486272/1‑67 GCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGC > 1:37972898/1‑68 TGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC < 1:4343421/67‑1 GGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG < 1:3726607/68‑1 ACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTTTTTGGGAAAAGCGGGGCGCAGGGCGA > 1:29889765/1‑68 ACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGGTTATTGGTGAAAAGCGGGGCGCCGGGC > 1:33939426/1‑66 ACCAGACGAGCAAGAAACCCCTCGCCCTGCGCCCGCCGTTTTTTGCTGAAAAGCGGGGCGCCGGGggc > 1:4151083/1‑65 ACGAGCCAGAAACGCATCGCCCTGCGCCCGCCGTTTATTTCTGAACAGCGGGGCGAAGGGCGAAGCct > 1:9472869/1‑66 ACGAGCAAGAAACGCATCGCCCTGCGCCCGGCGTTTATTGGTGTAAAGCGCGCCGCAGGGCGCTGCcg > 1:7700662/1‑66 ACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAGGGGGGGCGCGGGGCGATGCGT > 1:3115613/1‑68 ACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGg > 1:29178076/1‑67 CGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTTTTGGTGAAAAGCGGGGGGCAGGGCGATGCGTT > 1:3814315/1‑68 CGAGCAAGAAACGCATCGCCCTGCGCCCGCCGGTTTTTGGTGAAAAGCGGGGCGCAGGGCGCTGGGTT > 1:10581043/1‑68 CGAGCAAGAAACGCATCGCCCTGCGCCCGCCGGTTATTGCTGAAAAGCGGGGCGCCGGGCGATGCGTT > 1:12920364/1‑68 AAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTT > 1:5747267/1‑67 ACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCG > 1:19639074/1‑67 CGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCG > 1:38334664/1‑66 CGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCG > 1:36531918/1‑66 ATCGCCCTGCGCCCGCCGTTTATTGCTGAGAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGG > 1:21074642/1‑68 GCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTT > 1:17586382/1‑67 GCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTT > 1:1484465/1‑67 CCCTGCGCCCGCCGTTTATTGCTGAACAGCGGGGCGCAGGGCGATGCGGTTCTTGCTCGTCTGGTTG > 1:2500754/1‑67 CCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTG > 1:32103839/1‑67 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:25944969/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:31216940/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:14770403/68‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:35473978/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:5774877/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:39103161/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:5451039/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:38944336/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:8713735/68‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:6558243/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:12836641/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:28168383/68‑1 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC > 1:29506572/1‑68 CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCC < 1:28279398/68‑1 TGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCG > 1:24170746/1‑67 TGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCG > 1:28117313/1‑67 TGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCG > 1:29334675/1‑67 tGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:151169/2‑68 tGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:2181828/2‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:22878268/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:18333128/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:27598417/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:25031589/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:29260388/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:35046564/1‑68 CGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:23121683/1‑68 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCt > 1:32070522/1‑66 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG < 1:7827124/68‑1 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:7165575/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:6333077/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:11147292/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:36512299/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:20443358/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:25596815/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:24780789/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:30119845/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA < 1:30933072/67‑1 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:32684453/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:2275945/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:37166069/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:20681797/1‑67 GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCA > 1:38705033/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:35583529/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:6322772/1‑67 CCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAG > 1:29583707/1‑67 CCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCC > 1:34924414/1‑68 CCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCC > 1:35994170/1‑68 CCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGC < 1:5447453/67‑1 CGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCA < 1:37768839/68‑1 CGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCA < 1:26931512/68‑1 TCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1823054‑1823129‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgcccGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCA < CP009273/1823150‑1823084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |