| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2590222 = | 300 (0.630) | 13 (0.030) | 6/90 | NT | 5.3% | intergenic (‑126/+42) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| ? | CP009273 | 2590249 = | 224 (0.590) | intergenic (‑153/+15) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase | |||||
Only 100 of 126 total aligned reads displayed.
CCGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2590298‑2590222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590249‑2590315 CCGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGC > 1:7706945/1‑68 CGTCGCCCGCCGCCTGGGTGTGCAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCCGCTGGC > 1:1805411/1‑67 CGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGC > 1:16437941/1‑67 CGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGC > 1:34082273/1‑67 CGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGC > 1:36301159/1‑67 CGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGG < 1:22999557/66‑1 CGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGATCATCATCTTGCCGTGCAGCTGG < 1:6399369/66‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGG < 1:28770334/68‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGG < 1:20765931/68‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGG < 1:20266977/68‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGG < 1:16756187/68‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:35769548/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:4289/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:27929346/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:22415472/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:14424824/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:1523897/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACG < 1:17388312/67‑1 CGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCAACATCTTGCCGTGCAGCTGGCACG < 1:9566253/67‑1 GCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGC < 1:33570274/68‑1 GCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGC < 1:22323261/68‑1 GCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGC < 1:14449104/68‑1 CCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA > 1:36433457/1‑68 CCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA > 1:26639043/1‑68 CCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA > 1:36938498/1‑68 CCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA > 1:18973637/1‑68 CCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA > 1:11347584/1‑68 CCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA > 1:38810917/1‑68 CCGCCGCGTGGGTGTACAGCTGGACTTATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:37075188/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:10818978/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:25143668/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:12771639/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:1490768/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:1744260/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:16260244/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:31878037/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:32930979/67‑1 CCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTGCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:20430909/67‑1 CCGCCGCCGGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCA < 1:30730227/67‑1 GCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCAAGA < 1:12120224/68‑1 GCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCAAG > 1:22968442/1‑67 GCCGCCTGGGTGTACAGCGGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCAAGA < 1:30736368/68‑1 ACTGATTTTTCTGTTCATCATCTTGCCGCGCAGCAGGCACGGCAAGATGATGAACAGAAAAATCAGT < 1:1365869/67‑1 TGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCAAGATGATGAACAGAAAAATCAGTCCA < 1:22224362/68‑1 TTTTTCTGTTCATCCTCTTGCCGTGCAGCTGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGC < 1:27406043/67‑1 TTTTTCTGTTCATCATCTTGCCGGGCCGCGGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCT < 1:22291729/68‑1 TTTTTCTGTGCATCATCTTGCCGTGCAGCTGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCT < 1:8292440/68‑1 TTTTTCTCTTCCTCATCTTGCCGTGCAGCTGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGC < 1:34209041/67‑1 TTTATCTGTTCATCATCTTGCCGTGCAGCGGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGC < 1:33067656/67‑1 CTGTTCATCATCTTGCCGGCCAGCGGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACA < 1:28979762/68‑1 CTGTTCAGCAACTGGCCGTGCAGCCCGCACGGCAATATGATGAACAGAAAAATCAGTCCAGCTGTACA < 1:34076337/68‑1 CTGTTCAACATCTTGCCGTGCAGCTGGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACA < 1:16883629/68‑1 CTGTCCATCATCTTCCCGCGCAGCTGCCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACA < 1:20929006/68‑1 CACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAG > 1:33269176/1‑68 ACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < 1:5649148/68‑1 ACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < 1:28898049/68‑1 ACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < 1:8659606/68‑1 ACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < 1:410609/68‑1 ACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < 1:16905135/68‑1 ACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGG < 1:38489087/68‑1 CGGCAAGATGATTAAAAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATATGC < 1:32308910/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:10828092/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:39140122/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:8213176/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:39289582/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:33975140/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:10763393/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:5025004/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:31312655/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:18599135/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:19605967/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:20094821/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:16389147/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:9126652/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:25644835/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:25877506/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:29337483/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:9049424/68‑1 CGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGC < 1:31087385/68‑1 GCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGTCGGCGTCATAGGCT > 1:38930866/1‑67 GCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCT > 1:2703372/1‑67 GCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCT > 1:31316949/1‑67 AAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCG < 1:27735230/68‑1 AAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCG > 1:28938959/1‑68 AAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCG < 1:29870180/68‑1 AAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCG < 1:14028590/68‑1 AAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCG < 1:20541392/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:10068162/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:10189609/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:10028001/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:36674600/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:1123999/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:31058986/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA < 1:30790519/68‑1 AGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGA > 1:20926047/1‑68 ATGATGAACAGAAAAATCAGTCCAGCTGTACCCCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGAT > 1:4881770/1‑67 ATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > 1:3976123/1‑68 ATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > 1:37862904/1‑68 ATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > 1:31285106/1‑68 ATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > 1:25123800/1‑68 CCGTCGCCCGCCGCCTGGGTGTACAGCTGGACTGATTTTTCTGTTCATCATCTTGCCGTGCAGCTGGCACGGCAAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2590298‑2590222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590249‑2590315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |