| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2590222 = | 300 (0.630) | 13 (0.030) | 6/90 | NT | 5.3% | intergenic (‑126/+42) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase |
| ? | CP009273 | 2590249 = | 224 (0.590) | intergenic (‑153/+15) | ypfJ/purC | putative neutral zinc metallopeptidase/phosphoribosylaminoimidazole‑succinocarboxamide synthetase | |||||
Only 100 of 434 total aligned reads displayed.
AGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590183‑2590315 | aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGTCAAgat < 1:37679141/67‑1 (MQ=255)aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:31924740/67‑1 (MQ=255)aggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAgat < 1:25363281/67‑1 (MQ=255) ggaATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTTCCGTGCCAGCTGCACGGCAAgatga > 1:38302659/1‑68 (MQ=255) aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGatgatg > 1:4526176/1‑68 (MQ=255) aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGatgatg > 1:19009116/1‑68 (MQ=255) aaTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGatgatg > 1:18785881/1‑68 (MQ=255) aTGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGAtgatga < 1:30568799/68‑1 (MQ=255) gAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAAc > 1:6329297/1‑68 (MQ=255) tgtacagctggactgatttttctgttcatcaTATTGCCGTGCGGGCTGCACGGCCAGTTGCTGAACAg < 1:34076337‑M1/37‑1 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:17458478/1‑68 (MQ=255) gCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAg > 1:27457234/1‑68 (MQ=255) gtacagctggactgatttttctgttcatcaTCTTGCCGTGCCCGCTGCACGGCAAGATGTTGAACAGa < 1:9712843‑M1/38‑1 (MQ=255) cGTTCAATGCATATATTCCGAGAGCGGTTGTCTTTACGTGCCCGCTGCACGGCAAGATGATGAACAGa > 1:22746086/1‑68 (MQ=255) tCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaa > 1:24408220/1‑68 (MQ=255) cAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGaaaaa < 1:19242290/68‑1 (MQ=255) agctggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGCACGGCAAGATGATGCACAGaaaaa < 1:8292440‑M1/42‑1 (MQ=255) gctggactgatttttctgttcatcaTCTTGCCGTGCCCGCTGCACGGCAAGATGATGAACAGataaa < 1:33067656‑M1/42‑1 (MQ=255) gctggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGCACGGCAAGATGAGGAAGAGaaaaa < 1:34209041‑M1/42‑1 (MQ=255) tggactgatttttctgttcatcaTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCa < 1:22224362‑M1/45‑1 (MQ=255) gCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCCCGGCAAGATGATGAACAGAAAAATCAg > 1:19703589/1‑68 (MQ=255) atatatTCCGAGAGCGTTTGTCTTGCGGTGCAAGCTGCACGGCAAGATGATGAACAGAAAAATCAGt < 1:6845675/67‑1 (MQ=255) atatatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAACATCAGt < 1:28579780/67‑1 (MQ=255) actgatttttctgttcatcatcttgccgcgcagcaggcacggcaagaTGATGAACAGAAAAATCAGt < 1:1365869‑M2/20‑1 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:5647177/68‑1 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:5167126/68‑1 (MQ=255) atatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa < 1:23893085/68‑1 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:1640459/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:20927385/1‑67 (MQ=255) tatTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:21686385/1‑67 (MQ=255) atTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:32829501/68‑1 (MQ=255) atTACGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGc < 1:12777832/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGTACAGAAAAATCAGTCCa > 1:13423431/1‑65 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt < 1:38516054/68‑1 (MQ=255) ttCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCt > 1:8636439/1‑68 (MQ=255) ttCCGAGAGCGGTTGTCATTCCGGGGCAGCGGGCCGGCAAGCTGTTGGAAAGAAAAATAAGTGCAGca > 1:17647479/1‑67 (MQ=255) ttCCGAGAGCGGTTGTCATGCCCTGCCAGCGGCACGGCAAGATGATGAACAGAAAAATAAGTCCa > 1:31656229/1‑65 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCCCGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:20746901/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:33455486/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:5824647/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:72722/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:31060228/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:24243774/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:14607205/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:21895558/1‑64 (MQ=255) tCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCa > 1:18012934/1‑64 (MQ=255) ccGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGt < 1:26504310/68‑1 (MQ=255) agagagGTTGTCTTGCCGTGCCAGCTGCAAGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGGac > 1:39390314/1‑67 (MQ=255) gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacc > 1:805781/1‑66 (MQ=255) gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTaca > 1:15876257/1‑67 (MQ=255) gagCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTaca > 1:34799868/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGCTGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:29006946/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:6092215/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:29391745/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:35585037/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTacac > 1:35275734/1‑67 (MQ=255) agCGGTTGTCTTGCCGTGCCAGCTGCACCGCAAGATGTTGAACAGAAAAAACAGTCCAGCTGGacac > 1:23512595/1‑67 (MQ=255) gCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACAcc < 1:20940676/67‑1 (MQ=255) ggTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAg > 1:17338422/1‑68 (MQ=255) tGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAggcg < 1:369662/68‑1 (MQ=255) TCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAggcggc < 1:12120224‑M1/68‑1 (MQ=255) CTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGgcggcg < 1:38191748‑M1/68‑1 (MQ=255) TGCCGTGCCAGCTGCACGGCAAGATGATGCACAGAAAAATCAGTCCAGCTGTACACCCAGGcggcgg < 1:20430909‑M1/67‑1 (MQ=255) TGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGcggcgg < 1:10818978‑M1/67‑1 (MQ=255) TGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcggg > 1:36433457‑M1/1‑68 (MQ=255) TGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcggg > 1:11347584‑M1/1‑68 (MQ=255) GCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggc < 1:22323261‑M1/68‑1 (MQ=255) CCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:16756187‑M1/68‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:14237815‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:33810102‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:14424824‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:4289‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:35769548‑M1/67‑1 (MQ=255) CGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCggcgggcg < 1:1523897‑M1/67‑1 (MQ=255) GCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACgg > 1:7706945‑M1/1‑68 (MQ=255) GCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACg > 1:36301159‑M1/1‑67 (MQ=255) CCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACg < 1:22999557‑M1/66‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:11218934/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:7042804/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGc < 1:16102447/67‑1 (MQ=255) cAGCTGCACGGCAAGATGATGAACAGAAAAATCACTCCAGCTGTACACCCAGGCGGCGGGCGACGGCt < 1:2971419/68‑1 (MQ=255) cTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCAAGGCGGCGGGCGACGGCTTCa > 1:1515419/1‑68 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCtt < 1:28010230/65‑1 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCtt < 1:36712760/65‑1 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTc < 1:25844941/66‑1 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAt > 1:4881894/1‑68 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAt > 1:16982804/1‑68 (MQ=255) tGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCAt > 1:27732226/1‑68 (MQ=255) acggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAgg < 1:28898049‑M2/59‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:39251707‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:9049424‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:18599135‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:20094821‑M2/60‑1 (MQ=255) cggcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGc < 1:22443871‑M2/60‑1 (MQ=255) gcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGTCGGCGTCATAGGCt > 1:38930866‑M2/7‑67 (MQ=255) gcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCt > 1:2703372‑M2/7‑67 (MQ=255) gcaagaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCt > 1:31316949‑M2/7‑67 (MQ=255) agaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGa < 1:10028001‑M2/65‑1 (MQ=255) agaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGa < 1:30790519‑M2/65‑1 (MQ=255) agaTGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGa < 1:10189609‑M2/65‑1 (MQ=255) | AGGAATGAGCGTTCAATGCATATATTCCGAGAGCGGTTGTCTTGCCGTGCCAGCTGCACGGCAAGATGATGAACAGAAAAATCAGTCCAGCTGTACACCCAGGCGGCGGGCGACGGCTTCATAGGCTTCGATC > CP009273/2590183‑2590315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |