| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 5 (0.010) | 4/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 155 total aligned reads displayed.
TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2925251‑2925176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > CP009273/2925206‑2925271 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGGTGATGTGATAATGCCGGATACGACGTTTGCGGCG > 1:26903770/1‑68TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG > 1:22144783/1‑68TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG > 1:35922508/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:19620303/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:276872/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:37493055/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:38071687/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:38669530/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:4649426/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:4818167/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:20709608/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:29566432/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:30404726/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:35734225/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:31244104/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:5784541/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:31866007/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:17161264/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:32438225/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:6091443/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:34712530/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:35693396/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:34151557/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGAAGTTTGCTGCGT > 1:27066340/1‑68 TAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:26217287/1‑68 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTAT < 1:2953345/68‑1 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:31850779/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:1100520/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:38494819/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:37174730/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:28809052/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA < 1:21437859/67‑1 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:33295771/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:14095920/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:18870183/1‑67 AGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCC > 1:35963659/1‑68 AGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCC > 1:32597228/1‑68 AGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCC > 1:37276809/1‑68 gcgTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:28505404/4‑68 gaTTTACCATACCGCCTGGTAAATGAGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:10215773/3‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCag > 1:12085323/1‑66 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCa > 1:28445268/1‑66 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:27746761/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:34963653/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:33209416/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:23878186/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:31838499/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:1928742/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:10064901/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:11858189/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:6711750/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:12488927/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:13333937/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:13342178/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:14458069/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:16240560/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:18210273/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:18252300/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:18812549/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:27265081/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:19404190/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:1947949/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:5042384/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:20543082/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:4426470/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:39132730/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:22907536/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:26034940/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:26354720/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTAGCGGCGTATCCG > 1:28631271/1‑68 GCTTTACCATACCGCCTGGTAAATGAGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:25985272/1‑68 CTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:27274365/1‑67 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:29023947/1‑66 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:12422864/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:21739397/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:39125061/68‑1 TAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGC < 1:680918/67‑1 AAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGCA < 1:18840195/67‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:34078518/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC > 1:15897966/1‑68 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:10044982/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:22387345/68‑1 TATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGT > 1:27221682/1‑68 TATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGT > 1:24929274/1‑68 ATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT < 1:22592784/68‑1 TCCGGCATTATCACCTAAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATCTCCTCAAGCGTT > 1:23193156/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTG < 1:20893706/68‑1 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:20268041/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:36547516/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:30834954/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:7541482/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:7767380/1‑67 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:36495479/1‑66 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:30286655/1‑66 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:6840450/1‑66 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:9668564/1‑66 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:9142349/1‑68 CATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC < 1:35308058/67‑1 CATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:9059748/1‑67 CATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCGCTACAATATCCTCAAGCGTTGCTTC < 1:37183233/67‑1 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2925251‑2925176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > CP009273/2925206‑2925271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |