| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 5 (0.010) | 4/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 545 total aligned reads displayed.
CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 | gaagcaacgcttgaggatattgtagagctttaccatacctcctggtaaatgcgctgatgtgataatGc > 1:8369586‑M1/67‑68 (MQ=255) gaagcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatg > 1:9059748‑M1/67‑67 (MQ=255) gaagcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGc > 1:28761290‑M1/67‑68 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:10037248/68‑1 (MQ=255) ttACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCgg < 1:1153134/68‑1 (MQ=255) caacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa < 1:20893706‑M1/6‑1 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg > 1:9668564‑M1/62‑66 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg > 1:6840450‑M1/62‑66 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCgg > 1:27249547‑M1/62‑66 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:36547516‑M1/62‑67 (MQ=255) acgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATa > 1:24929274‑M1/61‑68 (MQ=255) aaaCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAc < 1:10768293/68‑1 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg < 1:31358524‑M1/10‑1 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg > 1:31869912‑M1/59‑68 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:13260454/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:25141908/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:23885053/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:37326492/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATaag > 1:12557341/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGAAAcg > 1:19320510/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTGGGTACGGTAACGGCGAGCCGGATAcgc < 1:28202679/68‑1 (MQ=255) ccGATTTGCCTATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgcc > 1:39632835/1‑68 (MQ=255) ccGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgcc < 1:15371443/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg < 1:20661407/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAACTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg > 1:18434281/1‑68 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGGCGCCAAcgtc > 1:38057441/1‑68 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgt < 1:19085951/67‑1 (MQ=255) tCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTa > 1:5957736/1‑68 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:19794761/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAt < 1:22798714/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:4576501/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:15152097/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:6595226/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:23243962/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:2315482/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:37575024/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGAATCCGGCATTa < 1:33392667/68‑1 (MQ=255) tttACAGCAATTGCGGGTGGTACGGTAACGACGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:6499569/68‑1 (MQ=255) ttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACCTCGTATACGGCATTAt > 1:21164726/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATcaca > 1:25317317/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATcaca > 1:36168795/1‑67 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCCGTTTCGCCCCAAACGTCGTATCCCGGAATATtaca > 1:5074152/1‑67 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca < 1:18153761/65‑1 (MQ=255) aaTTGCGGTTGGTACGGCAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcac < 1:26565377/64‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:37075927/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:20232543/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:35199431/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:38907409/68‑1 (MQ=255) cGGTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCa > 1:18807626/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATAACATCAGCGCAt > 1:15802981/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAAAGTCGTTTACTGCAATATCACATCAGCGCAt > 1:16131800/1‑68 (MQ=255) ggTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAAAGTCGTATCCGGCAATAAAACATCAGCGCAt > 1:14040052/1‑68 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:33980938/68‑1 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:10490405/68‑1 (MQ=255) gTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATGACATCAGCGCATTTACCAGGCg > 1:27408711/1‑68 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg < 1:879681/67‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg < 1:24588338/67‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg < 1:17806842/67‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATAAGCGCATTTACCAGGCgg > 1:12158167/1‑68 (MQ=255) tAACGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCgg > 1:36461039/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGGAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:12756024/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGTCATTATCACATCAGCGCATTTACCAGGCGGt < 1:36915442/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCgg < 1:27608116/67‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:5488689/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt > 1:22116614/1‑68 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:38154853/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:38493163/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:17319099/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:30547007/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:5751048/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:13744372/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:13437056/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7244519/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7678997/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:12008049/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:25741557/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:30874114/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:31107774/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:30212839/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:34934744/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:29986290/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3248989/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:28977617/68‑1 (MQ=255) aaCGGCGAGCCCGATAACCCGCAAAAGTCGTTTACGGCATTATCACATCACCCCATTTAACAGGCGGt > 1:35464058/1‑68 (MQ=255) cGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTAt < 1:35794024/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCCAACGTCGTATCCGGCGTTATCACATCAGCGCATTTACCAGGCGGTATg > 1:39276038/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:22454303/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:3042173/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:14428778/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:2928095/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:34498812/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:38986831/68‑1 (MQ=255) gccGAGCCGGTTACGCCGGTAACGGCGTATCCGGCTTTATCACATCTGCGCATTTACCAGGCGGTATg < 1:20094133/66‑1 (MQ=255) taatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:21739397‑M1/64‑1 (MQ=255) gCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg > 1:9538216/1‑68 (MQ=255) gCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCATTATCACAACAGCGCATTTACCAGGCGGTATgg > 1:32908522/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGGATTATCACATCAGCGCATTTACCAGGCGGTATGGt > 1:32082325/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:16686514/67‑1 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATgg < 1:1121310/67‑1 (MQ=255) cGAGCCGGATACGCCGCAAAAGTCGTATCCGGCATTATAACATCAGCGCATTTACCAGGCGGTATGGt > 1:35958199/1‑68 (MQ=255) | CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |