| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3060669 = | 394 (0.830) | 16 (0.040) | 7/92 | NT | 5.7% | intergenic (‑137/+30) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein |
| ? | CP009273 | 3060693 = | 206 (0.530) | intergenic (‑161/+6) | ygfI/yggE | putative DNA‑binding transcriptional regulator/oxidative stress defense protein | |||||
Only 100 of 131 total aligned reads displayed.
TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3060745‑3060669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA > CP009273/3060693‑3060759 TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTC > 1:19705657/1‑68TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTC > 1:22128143/1‑68 AGAACCTGTGGATCAGCAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:21337553/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAGCACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG > 1:19235341/1‑68 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:36099024/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:34958189/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:36151482/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:717492/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:10655664/68‑1 AGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCG < 1:10377200/68‑1 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:364910/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:38272490/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:26349675/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:31870213/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:2443431/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:824822/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:20698423/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:9746537/1‑68 ACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCG > 1:11700662/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCTCAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:10861633/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:5397845/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:1231314/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:24754498/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:35121297/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:36082171/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:26017446/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:22458723/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:34212636/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:37210987/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:37394216/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:1493803/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:26559412/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:3353434/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:5659956/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:17954887/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:10710235/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:7513433/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:7971532/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:31264415/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:10602962/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:9202027/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:16324159/1‑68 CCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:31532408/1‑68 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:10988406/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:12130684/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:30761810/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:23698879/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:22574389/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:38979175/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:19425855/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:5427614/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:6879471/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:17225314/68‑1 CTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:16280189/68‑1 CTGTGGATCAAAAACCCGCTAAAACACCTGCATCACAATAATATTTGTAGCCCGACGTATTCGTCGGG < 1:34141624/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATATTATTTGTAGCCCGACGTATTCGTCGGGC < 1:24356878/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGC < 1:34660941/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGC < 1:10297558/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGC < 1:14481265/68‑1 TGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGG > 1:15653110/1‑66 GTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCT < 1:17338097/68‑1 GTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCT < 1:11035761/68‑1 CGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGT < 1:6037637/68‑1 TAAAACAGCTGCAGCACTATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCT < 1:28794292/68‑1 TAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCT < 1:10012407/68‑1 TAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCT < 1:35271418/68‑1 TAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCT < 1:35488323/68‑1 TAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCT < 1:20267956/68‑1 ACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGT < 1:37609018/68‑1 ACCTGCAGCACAATAATATTTGTAGCCCGACGTAATCGTCGGGCTACAAATATTATTGTGCTGCAGGT < 1:33220231/68‑1 AATAATCTTTGTAGCCCGCCGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGG < 1:19060273/68‑1 AATAATATTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGNTTTAGCGGG < 1:19015623/68‑1 ttaTTGTAGCCCGACGTATTCGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTT < 1:6864245/65‑1 CGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGG > 1:16893945/1‑68 CGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGG < 1:38390922/68‑1 CGTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGG < 1:32550803/68‑1 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGA < 1:21272938/68‑1 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGA > 1:8559604/1‑68 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGA < 1:11899332/68‑1 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGA > 1:24938717/1‑68 GTCGGGCTACAAATATTATTGTGCTGCAGGTGTATTAGCGGGTTGTTGATACACAGGTTCTAACTGGA < 1:17642233/68‑1 TCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAA > 1:4795954/1‑68 TCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAA > 1:15088336/1‑68 TCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAA > 1:35511725/1‑68 TCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAA > 1:34486825/1‑68 TCGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAA > 1:17285852/1‑68 ctGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:28635537/66‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:20193660/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG < 1:25113631/68‑1 CGGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAG > 1:7539331/1‑68 GGGCTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGA < 1:16905536/68‑1 CTACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACC > 1:13678704/1‑67 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:2959033/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:23036280/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:9260068/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:7535060/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:37630960/68‑1 TACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:1534605/68‑1 TACAAACATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCAC < 1:36952892/68‑1 ACAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA < 1:23479737/68‑1 TAGAACCTGTGGATCAACAACCCGCTAAAACACCTGCAGCACAATAATATTTGTAGCCCGACGTATTCGTCGGGCTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3060745‑3060669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgggctaCAAATATTATTGTGCTGCAGGTGTTTTAGCGGGTTGTTGATCCACAGGTTCTAACTGGAAGACCACA > CP009273/3060693‑3060759 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |