| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3215213 = | 421 (0.890) | 44 (0.110) | 11/96 | NT | 10.3% | coding (389/984 nt) | ebgR | transcriptional repressor |
| ? | CP009273 | 3215274 = | 404 (0.990) | coding (450/984 nt) | ebgR | transcriptional repressor | |||||
Only 100 of 170 total aligned reads displayed.
CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAG > CP009273/3215274‑3215340 CCACCGCATCGTAACCGCTGCCGGGTTCGTTAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG < 1:25701385/68‑1CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:17947498/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:8335086/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:33549311/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:3233652/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:2183232/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:29468425/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:22542767/1‑68CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG < 1:37034917/68‑1CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:1526370/1‑68CCACCGCATCGTAACCGCTGCCGGGGTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG < 1:38379641/68‑1 CACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTG > 1:36157182/1‑67 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:1616191/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:25872694/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:27641993/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:16839911/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:5318306/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:4851372/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:3726939/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:13267586/1‑68 ACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGC > 1:34345318/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:20685163/1‑68 CCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCA > 1:4721744/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC < 1:24204128/68‑1 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC > 1:8541036/1‑68 GCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGC > 1:4206503/1‑68 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:29020996/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:13780350/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:19644225/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:14387512/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:37974306/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:35441833/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG < 1:3338418/68‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:30210945/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:15396148/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:33836068/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:29707904/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG > 1:21480175/1‑67 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCG < 1:34384982/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCG < 1:22124000/67‑1 ATCGTAACCGCTGCCGGGTTCGTGAAAGGCGATACAACAGATATTGTCGGTCAACGCGCGGGCAGCG < 1:34925829/67‑1 TCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGT < 1:31739049/68‑1 AACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTAC < 1:4245832/67‑1 AACCGCTGCCGGGTGCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACG < 1:30931131/68‑1 CCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:26518868/68‑1 CGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGAT < 1:19080366/67‑1 GCTGCCGGGTGCCTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGC < 1:7808858/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATCTTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGG < 1:34532866/68‑1 TGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGG < 1:27011361/68‑1 TGCCGGGTTCGTGAAAGGCGATAAAACAGATATTGTCGGTCACCGCGCTGGCAGCGGTTACGATGCGG < 1:7043464/68‑1 GCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCGGGCAGCGGTTACGATGCGGT < 1:1478830/68‑1 GCCGGGTTCGTGAAAGTCGATAAAACAGATATTGGCGGGCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:23448138/68‑1 GCCGGGGCCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:28349616/68‑1 GCCGGGATCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACCCGCTGGCTGCGGTTACGATGCGGT < 1:15541119/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:27722033/68‑1 CGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:31100414/68‑1 CGGGTTCGGGAAAGTCGATAAAACCGCTATTGGCGGTCACCGCGCTGGCAGCGGTTACGATGCGGTGG < 1:32620693/68‑1 CGGGGTCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGG < 1:6550336/68‑1 CGGCTTCGTGAAACTCGATAAAACAGATATTGTCGCGCAACGCGCTGGCAGCGGTTACGATGCGGT < 1:25028054/66‑1 GGGTTCGTGAAAGGCGATAAAACCGATATTGGCGGGCAACGCGCGGGCAGCGGTTACGATGCGGTGGA < 1:6620576/68‑1 GGGGTCGTGAAACTCGATAACCCAGATATTGTCGGTCCCCGCGCTGGCAGCGGTTACGATGCGGTGGA < 1:35251029/68‑1 ggTCGTGAAAGTCGATAAACCAGATATTGGCGGCCAACGCCCGGGCAGCGGTTACGATGCGGTGGAT < 1:2098629/65‑1 GTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:12947867/67‑1 GTTCGTGAAAGTCGAAAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGAT < 1:17529689/67‑1 TTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGGTTACGATGCGGTGGATA < 1:39465624/67‑1 TTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCAGGCAGCGGTTACGATGCGGTGGATA < 1:9290062/67‑1 TCGTGAAAGTCGATAAAACAGATATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGATATC < 1:17165426/68‑1 GTGAAAGGCGATAAAACAGCTATTGTCGGTCAACGCGCTGGCAGCGGTAACGATGCGGTGGATATCGA < 1:8645257/68‑1 TATTGTCGGGCAACGCGCTGGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGT < 1:4356515/64‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:10077154/68‑1 GGCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATAT < 1:38360849/68‑1 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:35607110/1‑68 GCAGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATC > 1:17939962/1‑68 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:24397910/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:10697063/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:7982840/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:16164226/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:439591/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:39487340/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA > 1:21975046/1‑67 AGCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCA < 1:26752964/67‑1 AGCGGTTACGATGCGGTGGATATCGATCTGGAACGCATCACTAAAGAAATCATCGACTTCTATATCA > 1:39284217/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCGTCAGTAAAGAAATCATCGACTTCTATATCAA > 1:16604317/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:1965352/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:4839879/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:17032419/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:21162682/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:34702952/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:23246807/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA > 1:11375131/1‑67 GCGGTTACGATGCGGTGGATATCGATCTGGAACGCATCAGTAAAGAAATCATCGACTTCTATATCAc > 1:20136458/1‑66 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACC < 1:31502052/67‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:20764731/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:30505911/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:12442564/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAAC < 1:8430111/66‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:34689008/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:19737273/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:7556343/65‑1 GGTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAA < 1:14175512/65‑1 CCACCGCATCGTAACCGCTGCCGGGTTCGTGAAAGTCGATAAAACAGATATTGTCGGTCAACGCGCTGGCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/3215287‑3215213‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcggTTACGATGCGGTGGATATCGATCTGGCACGCATCAGTAAAGAAATCATCGACTTCTATATCAACCAG > CP009273/3215274‑3215340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |