| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4512275 = | 356 (0.750) | 35 (0.090) | 13/92 | NT | 10.0% | coding (1637/1968 nt) | yjhG | putative dehydratase |
| ? | CP009273 | 4512318 = | 337 (0.860) | coding (1594/1968 nt) | yjhG | putative dehydratase | |||||
Only 100 of 615 total aligned reads displayed.
TTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTA > CP009273/4512208‑4512342 | ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:234612/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:14810814/68‑1 (MQ=255)ttCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGc < 1:16270541/68‑1 (MQ=255) gaaacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGa < 1:20750304‑M1/4‑1 (MQ=255) aTTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGAt < 1:5871582/68‑1 (MQ=255) ttAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGAt > 1:15749395/1‑67 (MQ=255) aacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGAt > 1:35922536‑M1/63‑67 (MQ=255) aacctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGAt > 1:18629309‑M1/63‑67 (MQ=255) acctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc < 1:5389034‑M1/7‑1 (MQ=255) acctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc > 1:31416528‑M1/62‑68 (MQ=255) acctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc > 1:24445917‑M1/62‑68 (MQ=255) cctaccaggttaccagtgccctgaagcatctgtcatacggtaagcttgtttcgttaatcaCCGATGc < 1:14916120‑M1/7‑1 (MQ=255) cctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc < 1:12735934‑M1/7‑1 (MQ=255) cctaccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGc < 1:35052647‑M1/7‑1 (MQ=255) taccaggttaccagtgccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGCAcg > 1:16991491‑M1/59‑68 (MQ=255) aTCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAc > 1:152899/1‑67 (MQ=255) aTCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAc > 1:28159841/1‑67 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:23996011/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:32913341/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgcg < 1:34360876/68‑1 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgc > 1:16478965/1‑67 (MQ=255) ccccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCAcgc > 1:3082614/1‑67 (MQ=255) ccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGcc < 1:14545253/68‑1 (MQ=255) ccGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGcc < 1:35587640/68‑1 (MQ=255) ggTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAg < 1:21403325/68‑1 (MQ=255) ggTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAg < 1:6828195/68‑1 (MQ=255) ggTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAg < 1:36610541/68‑1 (MQ=255) ggTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAg < 1:13048905/68‑1 (MQ=255) tGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTa > 1:39265198/1‑68 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:38159982/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:8542200/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAAc > 1:17736168/1‑67 (MQ=255) aTTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACg < 1:800496/68‑1 (MQ=255) aTTTACCGATGGGGCCTCCGGCAAGCGCTTCTGGCCCCACATGGCCCATGCACGAGCCAGTAGAAAc > 1:22986141/1‑67 (MQ=255) gccctgaagcatctgtcatacggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACg < 1:11783313‑M1/24‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGcc < 1:19365000/68‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGcc < 1:22515943/68‑1 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGc > 1:2596294/1‑67 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGc > 1:21998937/1‑67 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGc > 1:36231559/1‑67 (MQ=255) ttACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGCAGAAACGc > 1:26275493/1‑67 (MQ=255) aCCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCg > 1:1748105/1‑68 (MQ=255) aCCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCg > 1:38666019/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCgaga > 1:29308378/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCgaga > 1:10342822/1‑68 (MQ=255) gATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCgaga > 1:37079114/1‑68 (MQ=255) tGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGaaa < 1:20295977/68‑1 (MQ=255) ggggCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCGCGCGGCAGTAGAAACGCCCGAGAAAc < 1:33542672/68‑1 (MQ=255) ggCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGt > 1:12374234/1‑68 (MQ=255) ccTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAACCGTGc > 1:10661149/1‑68 (MQ=255) ccTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGc > 1:37744001/1‑68 (MQ=255) ccTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGc > 1:31134033/1‑68 (MQ=255) ccGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATc > 1:4867543/1‑68 (MQ=255) ggCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCgg < 1:30504815/68‑1 (MQ=255) acggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:3994752‑M1/44‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:24948182/67‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:37332904/67‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:33882106/67‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:27189854/67‑1 (MQ=255) ccAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGt < 1:29977499/67‑1 (MQ=255) ggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGTTGa < 1:27524678‑M1/46‑1 (MQ=255) ggtaagcatgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:1000116‑M1/46‑1 (MQ=255) ggtaagcatgtttcgttaataaCCGATGCACGCGCCAGTTGAAACGCCCGAGAAACGTGCATCGGTGa < 1:22699400‑M1/46‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:6617993/68‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:38935432/68‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:15094478/68‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:26906281/68‑1 (MQ=255) cAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGa < 1:23767224/68‑1 (MQ=255) ttCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACg < 1:24188894/68‑1 (MQ=255) catgtttcgttaatcaCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACg < 1:22245677‑M1/52‑1 (MQ=255) tCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGa < 1:31714088/68‑1 (MQ=255) tGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGaa > 1:11401891/1‑67 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACa < 1:13937714/67‑1 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACa < 1:19588711/67‑1 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt > 1:1597401/1‑68 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt > 1:25219117/1‑68 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt > 1:6238990/1‑68 (MQ=255) ccccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACAt > 1:11207453/1‑68 (MQ=255) cccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATg < 1:13351387/68‑1 (MQ=255) cccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATg < 1:18377948/68‑1 (MQ=255) cccACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATg < 1:34548262/68‑1 (MQ=255) caTGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCtt > 1:28764335/1‑67 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:12278883/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:33150402/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:452825/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:6413089/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:13668602/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:14114342/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:7740750/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:7282378/68‑1 (MQ=255) tGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:3215033/68‑1 (MQ=255) tGGCCGATGCACGCGACAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTAcc < 1:2567593/68‑1 (MQ=255) gCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:8265206/1‑68 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCttacctta < 1:19004214‑M1/68‑4 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:28879018‑M1/1‑67 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:21204420‑M1/1‑67 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:20995853‑M1/1‑67 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:19770336‑M1/1‑67 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGt > 1:9723847‑M1/1‑67 (MQ=255) CCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTa < 1:18140287‑M1/68‑1 (MQ=255) | TTCAATTAAATCCCCGGTGCGTAATTTACCGATGGGGCCTCCGGCCAGCGCTTCTGGCCCCACATGGCCGATGCACGCGCCAGTAGAAACGCCCGAGAAACGTGCATCGGTGATTAACGAAACATGCTTACCGTA > CP009273/4512208‑4512342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |