| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 772557 = | 181 (0.380) | 7 (0.020) | 5/98 | NT | 5.4% | coding (760/1266 nt) | tolA | membrane anchored protein in TolA‑TolQ‑TolR complex |
| ? | CP009273 | 772577 = | 89 (0.210) | coding (780/1266 nt) | tolA | membrane anchored protein in TolA‑TolQ‑TolR complex | |||||
Only 100 of 235 total aligned reads displayed.
CTGCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGC > CP009273/772492‑772624 | tgcagcttttgccgctgccgcttttttgtctgcggcggctttttctgcctctgctttcttatcagc > 1:39012155‑M1/65‑66 (MQ=255) tgcagcttttgccgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcagc > 1:20306078‑M1/65‑66 (MQ=255) tgcagcttttgacgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcagc > 1:38650246‑M1/65‑66 (MQ=255) gcagcttttgccgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcagctgc > 1:13166659‑M1/64‑68 (MQ=255) gCAGCTGGTCCGACAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctcc < 1:28583972/68‑3 (MQ=37) gCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc < 1:9484215/68‑1 (MQ=255) gCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc < 1:9090736/68‑1 (MQ=255) gCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgctgc < 1:25882475/68‑1 (MQ=255) gCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGgct > 1:3460325/1‑66 (MQ=255) gCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa > 1:17429371/1‑68 (MQ=255) gCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGa > 1:36020227/1‑68 (MQ=255) ttttgccgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGctgctg > 1:9792379‑M1/59‑65 (MQ=255) ttttgccgctgccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGctgctg > 1:8073142‑M1/59‑65 (MQ=255) tGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGctgctg < 1:27857497/65‑1 (MQ=255) tGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGaaa > 1:24469471/1‑68 (MQ=255) aTAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAg > 1:37506983/1‑68 (MQ=255) tAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCGGCTGAAAAgg < 1:13595348/68‑1 (MQ=255) tAAGAAAGCGGCAGCAGAGAAACCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAgg < 1:21891012/68‑1 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:4669920/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:26533800/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:587606/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:22526247/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:10540115/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:20173620/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:15143287/1‑68 (MQ=255) aGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgca > 1:1241471/1‑68 (MQ=255) aaaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagc > 1:19025191/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:22125948/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:32011773/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:38262806/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:19651773/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:6967767/1‑68 (MQ=255) aaGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:5694202/1‑68 (MQ=255) aGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:39398036/1‑67 (MQ=255) aGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:21600978/1‑67 (MQ=255) aGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:2478405/1‑67 (MQ=255) aGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAG‑AAAAGCGGCTGCTGAAAAGGCagcagc < 1:2695942/68‑1 (MQ=255) gccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCagcagc > 1:17839492‑M1/49‑68 (MQ=255) gccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCagcagc > 1:36244094‑M1/49‑68 (MQ=255) gCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGgcagca > 1:18301491/1‑66 (MQ=255) gCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:24231757/68‑1 (MQ=255) ccgcttttttgtctgcggcggctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCagcagc > 1:17282728‑M1/48‑67 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:35671563/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:14986466/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:839949/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:29515780/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:27354063/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:38001944/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:26259118/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:26173115/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:17984617/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:23251654/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCagcagc < 1:25229190/66‑1 (MQ=255) ggCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTg < 1:29246946/68‑1 (MQ=255) gcagcaGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa > 1:14309831/1‑68 (MQ=255) gcagcaGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa > 1:36751584/1‑68 (MQ=255) cagcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa < 1:12136143/67‑1 (MQ=255) cagcagAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGa < 1:35099961/67‑1 (MQ=255) ttttttgtctgcggcggctttttctgccgctgctttcttatcaGCTGCTGAAAAGGCAGCAGCTGATa > 1:15357463‑M1/44‑68 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:10616461/65‑1 (MQ=255) agagAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATa < 1:3434098/65‑1 (MQ=255) gaAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGaaa < 1:24061337/67‑1 (MQ=255) aaGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagca > 1:7887092/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGGTGATAAGAAagcagc > 1:6783897/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:860580/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:33927764/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:19541767/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:27094814/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:11595337/1‑68 (MQ=255) gCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAagcagc > 1:20659931/1‑68 (MQ=255) cTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:1185462/1‑68 (MQ=255) cTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:1880243/1‑68 (MQ=255) tGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCg > 1:32398834/1‑67 (MQ=255) gCAGCGGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGc < 1:17172302/68‑1 (MQ=255) aGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAg > 1:30072649/1‑68 (MQ=255) aGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAg > 1:1340985/1‑68 (MQ=255) gCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:28260821/1‑68 (MQ=255) gCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:16748820/1‑68 (MQ=255) gCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa > 1:4332455/1‑68 (MQ=255) ccGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGaa > 1:21145787/1‑68 (MQ=255) cGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGa < 1:23418482/66‑1 (MQ=255) agcagcAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAgccgcc > 1:19219050/1‑67 (MQ=255) gcagcaGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc > 1:11813974/1‑68 (MQ=255) gcagcaGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCcgccgc > 1:6562891/1‑68 (MQ=255) cagcagAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCa > 1:35340583/1‑68 (MQ=255) agcagAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAg > 1:6435552/1‑68 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGAc < 1:16889077/67‑1 (MQ=255) agAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACa > 1:30535326/1‑68 (MQ=255) aaaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaa > 1:31549582/1‑68 (MQ=255) cttatcaGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGCCaaaa < 1:33423678‑M1/61‑1 (MQ=255) aaaaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGTAGAAAAAGCCGCCGCAGACa < 1:29883693/65‑1 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGGCGCCGCAGACaaaaaa > 1:29327641/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:10002593/1‑68 (MQ=255) aaGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACaaaaaa > 1:34394139/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:722389/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:32963684/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:28150848/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:15578833/1‑68 (MQ=255) cGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAagcg > 1:20836825/1‑68 (MQ=255) GCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACCAAACcgcggc < 1:31278541‑M1/68‑1 (MQ=255) | CTGCAGCTGATAAGAAAGCGGCAGCAGAGAAAGCTGCAGCCGACAAAAAAGCAGCAGAAAAAGCGGCTGCTGAAAAGGCAGCAGCTGATAAGAAAGCAGCGGCAGAAAAAGCCGCCGCAGACAAAAAAGCGGC > CP009273/772492‑772624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |