| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 223 (0.470) | 14 (0.030) | 11/96 | NT | 6.1% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 239 (0.590) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 290 total aligned reads displayed.
CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCC > CP009273/1433100‑1433233 | cGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTg > 1:11840190/1‑68 (MQ=255)cGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTg > 1:32195913/1‑68 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:5054004‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:10044465‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:3873784‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:8915534‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:2462849‑M1/2‑1 (MQ=255)agggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg < 1:21325238‑M1/2‑1 (MQ=255) gAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTg > 1:29178236/1‑67 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:20380349‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:15089289‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:23850699‑M1/4‑1 (MQ=255) ggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:37708117‑M1/4‑1 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTg > 1:30548189‑M1/64‑65 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:8555247‑M1/64‑67 (MQ=255) gtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc > 1:17574327‑M1/64‑67 (MQ=255) gCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc < 1:37130446/67‑1 (MQ=255) gcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgcaactggcaggctcTGgc < 1:16351726‑M1/4‑1 (MQ=255) aTCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGgc > 1:2884853/1‑65 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:25017483/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:22537761/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:5241265/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:26054627/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:16712528/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:26700644/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:30293116/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:7719797/68‑1 (MQ=255) cGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:1393064/68‑1 (MQ=255) cGCAGCGGTTACGGATTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:18280695/68‑1 (MQ=255) gCAGCGGTTACGGTTTTCACGAAATCAGTGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCtgt < 1:13174064/67‑1 (MQ=255) gCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGAGGTCGATTGGCGCtgt > 1:29626259/1‑67 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:34848392/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGa < 1:34289882/67‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt < 1:26169444/68‑1 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGAt > 1:20130372/1‑68 (MQ=255) ggTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCGGTGCGGa < 1:16160257/67‑1 (MQ=255) cGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTAcc > 1:10623671/1‑68 (MQ=255) cGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTAcc > 1:23569836/1‑68 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:25922758/1‑68 (MQ=255) ggTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCg > 1:9191294/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:18313892/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:33943887/1‑68 (MQ=255) ttttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGt > 1:16943143/1‑68 (MQ=255) tttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGtt < 1:31395576/68‑1 (MQ=255) tttCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGtt < 1:37265957/68‑1 (MQ=255) ctcGAACTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:30527668/66‑1 (MQ=255) cACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa < 1:6412922/68‑1 (MQ=255) aCGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCa > 1:5766398/1‑67 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAc > 1:26490999/1‑68 (MQ=255) cGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGCATTTACCGGTTGCAAc > 1:32926908/1‑68 (MQ=255) aaggccaggatctggtggaacgcaactggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGa > 1:19586466‑M1/37‑68 (MQ=255) aaTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa < 1:9488581/68‑1 (MQ=255) aaTCAGGGGCGGCATCGGAAACCACTGGCGGGCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa < 1:19254287/68‑1 (MQ=255) aTCATGGGCGGCATCGGAAACCACTGGCGGTCGATTGGGGCGGTGCGGATTTACCGGTTGCAACGGaa < 1:31721062/68‑1 (MQ=255) aTCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa > 1:984669/1‑67 (MQ=255) tCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa > 1:15562360/1‑66 (MQ=255) tCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGa > 1:39396897/1‑66 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:270634/68‑1 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:35662040/68‑1 (MQ=255) cAGGGGCGGCATCGGAAACCACTGGCGGGCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAAct < 1:18642149/68‑1 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:8162804/1‑68 (MQ=255) gggCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGGTGCAACGGAActtct > 1:18908698/1‑68 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct < 1:37432073/67‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct < 1:21996086/67‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtc < 1:38035363/66‑1 (MQ=255) ggcggcATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActt < 1:39185883/65‑1 (MQ=255) gcggcATCGGAAACCCCTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAActtct > 1:1467422/1‑66 (MQ=255) aTCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACgg < 1:11302982/68‑1 (MQ=255) tCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGa < 1:22846805/68‑1 (MQ=255) ggaacgcaactggcaggctcTGGCGGGGGGCGGATTTACCGGTTGCAACGGAACTTCTTCTacggtt < 1:28211038‑M1/47‑3 (MQ=255) aacgcaactggcaggctcTGGCGCTGTGCGGTTTTACCGGTTGCAACGGAACTTCTTGTACGGATTc < 1:28642917‑M1/49‑1 (MQ=255) aaaCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTc > 1:223770/1‑67 (MQ=255) aaaCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTc < 1:39146956/67‑1 (MQ=255) aCCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAc > 1:2139544/1‑67 (MQ=255) cACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg < 1:23158924/68‑1 (MQ=255) cACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgc > 1:31143189/1‑67 (MQ=255) aCTGGCGGTCGATTGGCTCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg > 1:30497718/1‑67 (MQ=255) aCTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAAGGGAACTTCTTCTACGGATTCAcgcg > 1:36957955/1‑67 (MQ=255) aCTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg > 1:27358838/1‑67 (MQ=255) aCTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCAcgcg > 1:25537810/1‑67 (MQ=255) cTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcc > 1:21595646/1‑68 (MQ=255) cTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcc > 1:4942512/1‑68 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:33281958/1‑67 (MQ=255) ggCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcca > 1:12204912/1‑67 (MQ=255) ggcaggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:2783097‑M1/10‑68 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:15690775/1‑67 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:36752890/67‑1 (MQ=255) cGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc > 1:11752453/1‑67 (MQ=255) cGGGCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagc < 1:31787876/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:25339359/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:20025379/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgc < 1:6855716/68‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:31020611/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:20848664/67‑1 (MQ=255) ggTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcg < 1:12846173/67‑1 (MQ=255) caggctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgcccgcg < 1:17372946‑M1/60‑1 (MQ=255) gATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCaga < 1:243370/68‑1 (MQ=255) TGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:7192446‑M1/66‑1 (MQ=255) TGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGcc > 1:12463390‑M1/1‑68 (MQ=255) TGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGcc > 1:3205160‑M1/1‑68 (MQ=255) | CGAGCATCGCAGCGGTTACGGTTTTCACGAAATCAGGGGCGGCATCGGAAACCACTGGCGGTCGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCC > CP009273/1433100‑1433233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |