| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1433166 = | 223 (0.470) | 14 (0.030) | 11/96 | NT | 6.1% | coding (1876/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase |
| ? | CP009273 | 1433229 = | 239 (0.590) | coding (1813/3525 nt) | pfo | pyruvate‑flavodoxin oxidoreductase | |||||
Only 100 of 371 total aligned reads displayed.
CGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT > CP009273/1433162‑1433294 | gctcTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGcgccagcgccag < 1:1950946‑M1/64‑1 (MQ=255) tcTGGCGCTGTGCGGATTTCCCGGTTGCAACGGAACTTCTTCTACGGATTCACgcgccagcgccagc < 1:10210863‑M1/65‑2 (MQ=255) ttGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:29577197/67‑1 (MQ=255) GGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCagag < 1:24773726‑M1/65‑1 (MQ=255) cgcgggcgcgtgaatccgtagaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGCCTg < 1:17372946‑M2/7‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:4680796‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:12204665‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:26986770‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:25633715‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:6064118‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:21416721‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:6428998‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:17998343‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg < 1:1593623‑M1/67‑1 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:16398799‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTg > 1:16567029‑M1/1‑67 (MQ=255) CGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGACAGAGCCTg < 1:16255497‑M1/67‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGcc < 1:5953665‑M1/68‑1 (MQ=255) GCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGc > 1:9747581‑M1/1‑67 (MQ=255) cgGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGTATTCACGCGCCAGCGCCAGAGCCTGCCa < 1:12727429‑M1/66‑1 (MQ=255) CTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCa < 1:18401082‑M1/68‑1 (MQ=255) GTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGt > 1:35995809‑M1/1‑68 (MQ=255) ggATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGc < 1:34984852/67‑1 (MQ=255) ggATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGc < 1:5099333/67‑1 (MQ=255) ggATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCg < 1:3401962/68‑1 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:27517444/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:24396403/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:38946355/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:38068547/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:13053491/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:22147116/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:14493796/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:19922208/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt < 1:5541171/67‑1 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:11150494/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:10309716/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:12531757/1‑67 (MQ=255) tttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt > 1:29891144/1‑67 (MQ=255) attACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGtt < 1:11815226/66‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:4501949/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:659584/68‑1 (MQ=255) ttACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcc < 1:33774857/68‑1 (MQ=255) tACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcca < 1:20957427/68‑1 (MQ=255) tACCGGTTGCAAAGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTcca < 1:22917003/68‑1 (MQ=255) atccgtagaagaagttccgttgcaaccggtaaatccgcacagcgccaGAGCCTGCCAGTTGCGTTcc < 1:7447957‑M2/20‑1 (MQ=255) tccgtagaagacgttccgttgcaaccggtaaagccgcacagcgccaGAGCCTGCCAGTTGCGTTccac < 1:23807379‑M2/22‑1 (MQ=255) aCCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccac < 1:27751069/68‑1 (MQ=255) ccGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacc < 1:7026950/68‑1 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:22316667/1‑68 (MQ=255) cGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTccacca > 1:2795437/1‑68 (MQ=255) gTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGGCTGCCAGTTGCGTTCCACCAGa > 1:39297956/1‑68 (MQ=255) ttGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGa < 1:20103594/67‑1 (MQ=255) tGCACCTGAACTTCTTCTACGTATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:25906526/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:16946632/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:8358047/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:32259147/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:10688497/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:35315690/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:35706399/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:1004028/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:36846921/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:2976060/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:15446024/67‑1 (MQ=255) tGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGAt < 1:26163506/67‑1 (MQ=255) aCGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg < 1:18642538/68‑1 (MQ=255) aCGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg < 1:3987485/68‑1 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTgg > 1:6879340/1‑67 (MQ=255) cGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGc < 1:35175925/68‑1 (MQ=255) cGGAACTTCTTCTACGGAATCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGc < 1:38753194/68‑1 (MQ=255) ccgttgcaaccggtaaatccgcacagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCttt < 1:34749805‑M2/37‑1 (MQ=255) aCTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCttt < 1:33477331/68‑1 (MQ=255) tcttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:3262688/1‑68 (MQ=255) cttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:26518750/1‑67 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCTACCAGATCCTGGCCTTTGCTAc < 1:28400006/68‑1 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:29234486/1‑66 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCt > 1:31741998/1‑66 (MQ=255) ttctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTAc < 1:15034890/68‑1 (MQ=255) ttctACGGATTCACCCGCCAGCGCCAGAGCCTGCCAGATGAGTTCCACCAGATCCTGTCCTATGCt > 1:13898215/1‑66 (MQ=255) tctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACt < 1:19746674/68‑1 (MQ=255) tctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACt < 1:19615418/68‑1 (MQ=255) tctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGCTCCACCAGATCCTGGCCTTTGCTACt < 1:21178958/68‑1 (MQ=255) ctACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCCCCAGATCCTCGCCGTTGCt > 1:20703907/1‑64 (MQ=255) aCGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:19241733/1‑68 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:36287090/1‑66 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:21036706/1‑66 (MQ=255) ggATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTa > 1:28673560/1‑66 (MQ=255) gATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACt > 1:37062100/1‑68 (MQ=255) aTTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACt < 1:23878127/67‑1 (MQ=255) aTTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACt < 1:25314998/67‑1 (MQ=255) cACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTg > 1:7872209/1‑68 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCa > 1:25100631/1‑68 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCa < 1:31177640/68‑1 (MQ=255) gcgccagcgccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCa < 1:18982024/68‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:20380349‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAcc < 1:29080848‑M2/64‑1 (MQ=255) gccaGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAc > 1:17574327‑M2/5‑67 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCAc > 1:30548189‑M2/3‑65 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:17725444‑M2/66‑1 (MQ=255) caGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:8915534‑M2/66‑1 (MQ=255) caGAGCCGGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCt < 1:37700358‑M2/66‑1 (MQ=255) | CGATTGGCGCTGTGCGGATTTACCGGTTGCAACGGAACTTCTTCTACGGATTCACGCGCCAGCGCCAGAGCCTGCCAGTTGCGTTCCACCAGATCCTGGCCTTTGCTACTGTAACTTTTGGCAATCGCACCCT > CP009273/1433162‑1433294 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |