| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2502173 | 247 (0.520) | 13 (0.030) | 8/92 | NT | 6.1% | coding (733/966 nt) | glk | glucokinase |
| ? | CP009273 | = 2502211 | 194 (0.500) | coding (695/966 nt) | glk | glucokinase | |||||
Only 100 of 371 total aligned reads displayed.
GCGGCACGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGC > CP009273/2502107‑2502240 | aCGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACg > 1:37014810/1‑68 (MQ=255) cGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACgg < 1:39174997/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:34330485/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:34548300/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:3290851/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:21909164/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:13245351/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:7388660/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:6949964/68‑1 (MQ=255) gATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGc < 1:25377758/68‑1 (MQ=255) tACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGccc < 1:35918132/68‑1 (MQ=255) tACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGccc < 1:22339159/68‑1 (MQ=255) tACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGcc < 1:37822823/67‑1 (MQ=255) aCCGCCCGCAATAAACCCGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:38297414/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa < 1:26276360/68‑1 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:22999948/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:15748681/1‑68 (MQ=255) aCCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCa > 1:37291507/1‑68 (MQ=255) ccgcccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCAt < 1:7747405/68‑1 (MQ=255) cgcccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATa > 1:17963694/1‑68 (MQ=255) gcccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTTCCGCCAAAACGGCCCATaa > 1:20837704/1‑68 (MQ=255) gcccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATaa > 1:1929344/1‑68 (MQ=255) gcccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATaa > 1:2849564/1‑68 (MQ=255) ccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATg > 1:22164268/1‑68 (MQ=255) ccgcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATg > 1:12670576/1‑68 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:9817889/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:24135700/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:10006124/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:19600824/68‑1 (MQ=255) gcAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGAc < 1:14349701/68‑1 (MQ=255) aTAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCa > 1:24527020/1‑68 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCaaaa < 1:1635312/68‑1 (MQ=255) aaCACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCaaaa < 1:39000442/68‑1 (MQ=255) acacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAAc > 1:34757417/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:32096513/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:16068405/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa < 1:16789525/68‑1 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:24304302/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa < 1:11975700/68‑1 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:23595081/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:18559915/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:6001135/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:39562196/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:20278825/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACa > 1:33411882/1‑68 (MQ=255) cacGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCAAAAACGGCCCATAATGACGCAAAACa > 1:37659163/1‑68 (MQ=255) cAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAAt < 1:27580897/68‑1 (MQ=255) aaTGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATgc < 1:822330/68‑1 (MQ=255) aTGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATgcg < 1:15188691/68‑1 (MQ=255) gTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCg < 1:34144922‑M2/68‑2 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:18615944‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:5284123‑M2/1‑65 (MQ=255) cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc > 1:28812384‑M2/1‑65 (MQ=255) gagaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggc > 1:35041093‑M2/1‑62 (MQ=255) gagaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggc > 1:21274142‑M2/1‑62 (MQ=255) gagaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggc > 1:21510641‑M2/1‑62 (MQ=255) agaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggca < 1:6289665‑M2/68‑8 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGCCGCAAAACAGCGACAATGCGCggcggcaa < 1:13542305‑M2/68‑9 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:23091730‑M2/68‑9 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:33864471‑M2/68‑9 (MQ=255) gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggca > 1:21827190‑M2/1‑60 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:28030660‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:29245064‑M2/67‑9 (MQ=255) aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa < 1:23556321‑M2/67‑9 (MQ=255) ttGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa > 1:29867595‑M2/1‑58 (MQ=255) tGAGCGCCAGATTGCCGCCAAACCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCg < 1:31627838/68‑1 (MQ=255) tGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCg < 1:4138989/68‑1 (MQ=255) aGCGCCAGATTGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctg > 1:36261300‑M1/1‑17 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:11623948/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:8979062/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCCACAATGCGCGGCGGCAATCGGt < 1:26648205/67‑1 (MQ=255) gcgcCAGATTGCCGCCAAAACGGCCCATAATGACCCAAAACAGCGACAATGCGCGGCGGCAATCGGt < 1:31088441/67‑1 (MQ=255) cgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGc > 1:14619023/1‑68 (MQ=255) gcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaatctggc > 1:35719230‑M2/1‑52 (MQ=255) cgATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa > 1:25711402/2‑65 (MQ=255) gATTGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaa < 1:19922191‑M1/68‑59 (MQ=255) gATTGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaa > 1:23039778‑M1/1‑10 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:328578‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:18911155‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:22950440‑M1/67‑60 (MQ=255) ttGCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaa > 1:28916390‑M1/1‑8 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaatctggcgctca > 1:29561686‑M2/1‑46 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:5237172/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:22674722/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:5524905/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:171354/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:16542260/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:15541795/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:24638166/65‑1 (MQ=255) ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGt < 1:11198989/67‑1 (MQ=255) ttGCCGCCAAAACGGCCCAAAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt < 1:10613442/65‑1 (MQ=255) gtgCCGCCgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaat < 1:3151806‑M1/66‑60 (MQ=255) gccgccgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaatctc > 1:433022‑M1/1‑6 (MQ=255) gccgccAAAACGGCCCATAATGACGCAAAACAGCGAGAATGCGCGGCGGCAATCGGTGCAGCTGTca > 1:27059604/1‑67 (MQ=255) cgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagc < 1:13739642/67‑1 (MQ=255) gccgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaatctcggg < 1:32946150‑M1/68‑66 (MQ=255) cgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaatctcgggac < 1:23343974‑M1/68‑68 (MQ=255) cgcgcattgtcgctgttttgcgtcattatgggccgttttggcggcaatctggcgctcaatctcgggac < 1:8162338‑M1/68‑68 (MQ=255) cAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagccagc < 1:20552979/68‑1 (MQ=255) cAAAACGGCCCATAATGACGCAAAACACCGACAATGCGCggcggcaatctggcgctcaatctcgggac > 1:36004199‑M2/1‑39 (MQ=255) | GCGGCACGATACCGCCCGCAATAAACACGCCGCCAAATGTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGC > CP009273/2502107‑2502240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |