New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 2502173247 (0.520)13 (0.030) 8/92 NT 6.1% coding (733/966 nt) glk glucokinase
?CP009273 = 2502211 194 (0.500)coding (695/966 nt) glk glucokinase

Only 100 of 292 total aligned reads displayed.

GTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTG  >  CP009273/2502145‑2502277
                                                                  |                                                                  
  cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc                                                                 <  1:32946150‑M2/68‑4 (MQ=255)
  cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc                                                                 >  1:18615944‑M2/1‑65 (MQ=255)
  cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc                                                                 >  1:26745204‑M2/1‑65 (MQ=255)
  cccGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggc                                                                 >  1:5284123‑M2/1‑65 (MQ=255)
    cGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcgg                                                               >  1:24604694‑M2/1‑63 (MQ=255)
       gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:33864471‑M2/68‑9 (MQ=255)
       gaTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:37677970‑M2/68‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcac                                                            <  1:3151806‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:23556321‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:22950440‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:21859239‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:34246915‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:328578‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:17663793‑M2/67‑9 (MQ=255)
        aTTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            <  1:28030660‑M2/67‑9 (MQ=255)
         ttGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaatc                                                          >  1:23039778‑M2/1‑58 (MQ=255)
         ttGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            >  1:16556240‑M2/1‑58 (MQ=255)
         ttGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaa                                                            >  1:28916390‑M2/1‑58 (MQ=255)
          tGAGCGCCAGATTGCCGCCAAACCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCg                                                         <  1:31627838/68‑1 (MQ=255)
          tGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCg                                                         >  1:5436059/1‑68 (MQ=255)
          tGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCg                                                         <  1:10994655/68‑1 (MQ=255)
             gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt                                                       <  1:6055316/67‑1 (MQ=255)
             gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt                                                       <  1:12488077/67‑1 (MQ=255)
             gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt                                                       >  1:23100856/1‑67 (MQ=255)
             gcgcCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt                                                       <  1:7784869/67‑1 (MQ=255)
             gcgcCAGATTGCCGCCAAAACGGCCCATAATGACCCAAAACAGCGACAATGCGCGGCGGCAATCGGt                                                       <  1:31088441/67‑1 (MQ=255)
             gcgcCAGATGGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGt                                                       <  1:33522536/67‑1 (MQ=255)
               gcCAGATTGCCGCCAAACCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa                                                    >  1:28402779/1‑68 (MQ=255)
                 cAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGc                                                  <  1:22282407/68‑1 (MQ=255)
                  cgATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCa                                                    >  1:25711402/2‑65 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCggcggcaatctggcgctca                                                 >  1:29561686‑M2/1‑46 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:8108329/65‑1 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:24638166/65‑1 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:2407013/65‑1 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:12337592/65‑1 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:26447198/65‑1 (MQ=255)
                     ttGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:5237172/65‑1 (MQ=255)
                     ttGCCGCCAAAACGGCCCAAAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCt                                                 <  1:10613442/65‑1 (MQ=255)
                       gccgccAAAACGGCCCATAATGACGCAAAACAGCGAGAATGCGCGGCGGCAATCGGTGCAGCTGTca                                             >  1:27059604/1‑67 (MQ=255)
                       gccgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTca                                             >  1:11770051/1‑67 (MQ=255)
                         cgccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcc                                          >  1:19398083/1‑68 (MQ=255)
                          gccAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagcca                                         >  1:39621896/1‑68 (MQ=255)
                            cAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTcagccagc                                       <  1:23450565/68‑1 (MQ=255)
                            cAAAACGGCCCATAATGACGCAAAACACCGACAATGCGCggcggcaatctggcgctcaatctcgggac                                       >  1:36004199‑M2/1‑39 (MQ=255)
                                aCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAgcgcgc                                   >  1:23728439/1‑68 (MQ=255)
                                aCGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAgcgcgc                                   <  1:14662350/68‑1 (MQ=255)
                                 cGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGcgcgcg                                  <  1:33674784/68‑1 (MQ=255)
                                    cccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGtt                                <  1:36236778/67‑1 (MQ=255)
                                    cccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTc                               >  1:16849139/1‑68 (MQ=255)
                                     ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg                              >  1:18999889/1‑68 (MQ=255)
                                     ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg                              <  1:2210830/68‑1 (MQ=255)
                                     ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg                              <  1:641806/68‑1 (MQ=255)
                                     ccATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCg                              <  1:22507767/68‑1 (MQ=255)
                                       aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt                            <  1:36268412/68‑1 (MQ=255)
                                       aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt                            <  1:35082374/68‑1 (MQ=255)
                                       aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt                            <  1:29882314/68‑1 (MQ=255)
                                       aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt                            <  1:988547/68‑1 (MQ=255)
                                       aTAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGt                            <  1:26059106/68‑1 (MQ=255)
                                         aaTGCCCCAAAACAGCCACAATGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtg                          >  1:37152784‑M2/1‑26 (MQ=255)
                                         aaTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTaa                          >  1:5821775/1‑68 (MQ=255)
                                         aaTCACGCAAACCACCCACAATGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtg                          >  1:25390170‑M2/1‑26 (MQ=255)
                                         aaTCACCCAAAACAGCGACAATGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtg                          >  1:18864090‑M2/1‑26 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:39057709/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:18508188/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:13722643/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:32384247/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:26437008/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:4199661/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:4699264/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:15442127/1‑68 (MQ=255)
                                          aTGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGAAGCTGTCAGCCAGCGCGCGTTCGGTAat                         >  1:34759918/1‑68 (MQ=255)
                                            gccGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAatat                       <  1:6808409/66‑1 (MQ=255)
                                            gACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAatat                       <  1:32176681/68‑1 (MQ=255)
                                            gACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAata                        >  1:34134491/1‑67 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAatatat                     >  1:7628193/1‑66 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATc                      <  1:11453262/67‑1 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATc                      <  1:20640470/67‑1 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt                     <  1:7239664/68‑1 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt                     <  1:11339908/68‑1 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt                     <  1:9174804/68‑1 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt                     <  1:27709603/68‑1 (MQ=255)
                                              cGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCt                     <  1:27820643/68‑1 (MQ=255)
                                               gCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCtt                    >  1:14201153/1‑68 (MQ=255)
                                                   aaCAGCGACAATGCGCggcggcaatctggcgctcaatctcgggacatttggcggcgtgtttattgcgg                >  1:35765822‑M2/1‑16 (MQ=255)
                                                    aCAGCGACGATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg                 >  1:20769094/1‑66 (MQ=255)
                                                    aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg                 >  1:36659393/1‑66 (MQ=255)
                                                    aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg                 >  1:8668358/1‑66 (MQ=255)
                                                    aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg                 >  1:38654917/1‑66 (MQ=255)
                                                    aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTg                 >  1:18117543/1‑66 (MQ=255)
                                                    aCAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGc               <  1:10134726/68‑1 (MQ=255)
                                                         gACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTgag          >  1:20076726/1‑68 (MQ=255)
                                                           cAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAt        <  1:27463522/68‑1 (MQ=255)
                                                            aaTGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAtt       <  1:12860504/68‑1 (MQ=255)
                                                              tGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAtttt     <  1:35586104/68‑1 (MQ=255)
                                                              tGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAttt      >  1:16383625/1‑67 (MQ=255)
                                                              tGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGAttt      >  1:28671824/1‑67 (MQ=255)
                                                                 gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg  >  1:17056953/1‑68 (MQ=255)
                                                                 gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg  >  1:13440261/1‑68 (MQ=255)
                                                                 gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg  >  1:20358113/1‑68 (MQ=255)
                                                                 gcggcgGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTg  >  1:21325384/1‑68 (MQ=255)
                                                                  |                                                                  
GTCCCGAGATTGAGCGCCAGATTGCCGCCAAAACGGCCCATAATGACGCAAAACAGCGACAATGCGCGGCGGCAATCGGTGCAGCTGTCAGCCAGCGCGCGTTCGGTAATATCTTTTGGCTTGAGATTTTCTG  >  CP009273/2502145‑2502277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.