New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2559874 =238 (0.500)10 (0.020) 7/96 NT 5.3% coding (370/1404 nt) eutA reactivating factor for ethanolamine ammonia lyase
?CP009273 2559934 = 155 (0.380)coding (310/1404 nt) eutA reactivating factor for ethanolamine ammonia lyase

Only 100 of 349 total aligned reads displayed.

CACAGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATT  >  CP009273/2559807‑2559940
                                                                   |                                                                  
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACGGGCGATCACGGATTCGAGGTGCGGc                                                                   <  1:26588610/68‑1 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCgg                                                                    >  1:10596972/1‑67 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCgg                                                                    >  1:4038096/1‑67 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCgg                                                                    >  1:3112624/1‑67 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCgg                                                                    >  1:10062833/1‑67 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGc                                                                   <  1:4397775/68‑1 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGc                                                                   <  1:2400356/68‑1 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGc                                                                   <  1:2127054/68‑1 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGc                                                                   <  1:18054701/68‑1 (MQ=255)
 acaGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGGGACCGGCGATCACGGATTCGAGCTGCGGc                                                                   <  1:28555214/68‑1 (MQ=255)
  gccggaaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaccccgcaatgctcGc                                                                   <  1:20937585‑M1/2‑1 (MQ=255)
  gccggaaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGc                                                                   <  1:6254830‑M1/2‑1 (MQ=255)
  gccggaaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGc                                                                   <  1:7927600‑M1/2‑1 (MQ=255)
  gccggaaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGc                                                                   >  1:10432853‑M1/66‑67 (MQ=255)
  gccggaaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGc                                                                   <  1:1481055‑M1/2‑1 (MQ=255)
    gCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCg                                                                >  1:19627681/1‑68 (MQ=255)
    cggaaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGcc                                                                  >  1:25130895‑M1/64‑66 (MQ=255)
      cGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCgg                                                               <  1:13045473/67‑1 (MQ=255)
      cGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGgc                                                              >  1:14959913/1‑68 (MQ=255)
      cGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGgc                                                              >  1:24790556/1‑68 (MQ=255)
      cGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGgc                                                              <  1:706523/68‑1 (MQ=255)
      cGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGgc                                                              >  1:13832125/1‑68 (MQ=255)
       aaagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGCCCGgcg                                                             <  1:3748104‑M1/8‑1 (MQ=255)
        aagcgttgattctggtgccatcatcatcaccggtgaaagcgcgaaaacccgcaatgctcGCCCGgcg                                                             >  1:13679045‑M1/60‑67 (MQ=255)
           ttCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTg                                                          >  1:33102914/1‑67 (MQ=255)
           ttCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTg                                                          >  1:12164043/1‑67 (MQ=255)
            tCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTgtc                                                        >  1:6147125/1‑66 (MQ=255)
            tCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGc                                                        >  1:26084053/1‑68 (MQ=255)
            tCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGc                                                        >  1:34615862/1‑68 (MQ=255)
                 aaGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACg                                                    <  1:28674940/67‑1 (MQ=255)
                 aaGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACg                                                    >  1:17471475/1‑67 (MQ=255)
                 aaGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACg                                                    <  1:36235144/67‑1 (MQ=255)
                 aaGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACg                                                    <  1:3535821/67‑1 (MQ=255)
                 aaGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACg                                                    >  1:18749928/1‑67 (MQ=255)
                 aaGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACg                                                    <  1:10782529/67‑1 (MQ=255)
                 aaGGGTTTCTGCCGCGGCGCCGGCACCGGCGAGCACCGATTCGATGTGCGGCCCGGCGCTGGCaaag                                                    <  1:27382117/67‑3 (MQ=255)
                    ggTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACaa                                                >  1:14632125/1‑68 (MQ=255)
                    ggTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACaa                                                >  1:15552763/1‑68 (MQ=255)
                      tttGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACaaaa                                              >  1:9345464/1‑68 (MQ=255)
                      tttGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACaaaa                                              >  1:3786284/1‑68 (MQ=255)
                      tttGTGCCCCGGCTCCGAGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACaaaa                                              >  1:21967838/1‑68 (MQ=255)
                          tgCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCg                                           >  1:38955855/1‑67 (MQ=255)
                          tgCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCg                                           >  1:3877345/1‑67 (MQ=255)
                             cccGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCa                                       <  1:22517382/68‑1 (MQ=255)
                             cccGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCa                                       <  1:30648775/68‑1 (MQ=255)
                             cccGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCa                                       <  1:5481238/68‑1 (MQ=255)
                              ccGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCa                                       >  1:35007602/1‑67 (MQ=255)
                               cGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGc                                     <  1:17736061/68‑1 (MQ=255)
                               cGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGc                                     <  1:3017745/68‑1 (MQ=255)
                                 gCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCg                                    >  1:8151149/1‑67 (MQ=255)
                                 atcaccggtgaaagcgcgaaaacccgcaatgctcGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   >  1:18458006‑M1/35‑68 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:6798909/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:2647345/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:5882382/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:33261103/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:19905971/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:34227173/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:35763368/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:36585430/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:1713766/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:166824/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:38437233/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:7642248/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:4832652/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:4262642/67‑1 (MQ=255)
                                  cTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGa                                   <  1:2438176/67‑1 (MQ=255)
                                   tCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCg                                    >  1:29738297/1‑65 (MQ=255)
                                   tCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCg                                    >  1:4922259/1‑65 (MQ=255)
                                   tCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCg                                    >  1:1623759/1‑65 (MQ=255)
                                   tCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCg                                    >  1:21566908/1‑65 (MQ=255)
                                       tGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTgaga                             >  1:19229033/1‑68 (MQ=255)
                                          ccGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGagagag                          <  1:309954/68‑1 (MQ=255)
                                          ccGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGagagag                          <  1:29589128/68‑1 (MQ=255)
                                          ccGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGagagag                          <  1:25558524/68‑1 (MQ=255)
                                            ggCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAgcg                        <  1:11479522/68‑1 (MQ=255)
                                            ggCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAgcg                        <  1:26755382/68‑1 (MQ=255)
                                            ggCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAgcg                        <  1:38050226/68‑1 (MQ=255)
                                            ggCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAgc                         >  1:27852238/1‑67 (MQ=255)
                                               gATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGcc                      <  1:880293/67‑1 (MQ=255)
                                               gATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCa                     <  1:1200814/68‑1 (MQ=255)
                                               gATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCa                     <  1:23398675/68‑1 (MQ=255)
                                                 tCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATc                   <  1:39556251/68‑1 (MQ=255)
                                                    cGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAcc                <  1:33470535/68‑1 (MQ=255)
                                                    cGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAcc                >  1:8894840/1‑68 (MQ=255)
                                                    cGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAcc                <  1:22564501/68‑1 (MQ=255)
                                                    cGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAcc                >  1:20595820/1‑68 (MQ=255)
                                                     ggATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAccg               <  1:17419293/68‑1 (MQ=255)
                                                        ttCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAccggcg            >  1:27103368/1‑68 (MQ=255)
                                                        ttCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCAccgccg            >  1:26294019/1‑68 (MQ=255)
                                                         tCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCgg           <  1:27926382/68‑1 (MQ=255)
                                                          cGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCgg           >  1:31695779/1‑67 (MQ=255)
                                                             ggTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGa       >  1:3260118/1‑68 (MQ=255)
                                                               tGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCCCCGCCGGGCGAGc     >  1:11727731/1‑68 (MQ=255)
                                                               tGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGc     >  1:23712667/1‑68 (MQ=255)
                                                                gCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGc     <  1:29045480/67‑1 (MQ=255)
                                                                 cGGCCCGGCGCTGGCAACGACAAACTCGCCCCGCGACTGAGCGAGCGCCATCACCGCCGGGCGAGCa    <  1:1333761/67‑1 (MQ=255)
                                                                  ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt  >  1:32173924/1‑68 (MQ=255)
                                                                  ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt  <  1:7329139/68‑1 (MQ=255)
                                                                  ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt  <  1:31556911/68‑1 (MQ=255)
                                                                  ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt  <  1:9512437/68‑1 (MQ=255)
                                                                   |                                                                  
CACAGCCGTTGTTCAGAAAGGGTTTGTGCCCCGGCTCCGTGACCGGCGATCACGGATTCGAGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATT  >  CP009273/2559807‑2559940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.