| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2559874 = | 238 (0.500) | 10 (0.020) | 7/96 | NT | 5.3% | coding (370/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase |
| ? | CP009273 | 2559934 = | 155 (0.380) | coding (310/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
Only 100 of 279 total aligned reads displayed.
AGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGCTC > CP009273/2559867‑2560000 | ggTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGa > 1:15300682/1‑68 (MQ=255) ggTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGa > 1:4889624/1‑68 (MQ=255) ggTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGa > 1:3260118/1‑68 (MQ=255) ggTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGa > 1:13597696/1‑68 (MQ=255) gctcgcccggcggtgatggcgctctctcagtcgctgggcgattttgtcgttgccagcgccgggcGAGc < 1:29592735‑M2/4‑1 (MQ=255) gCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGc < 1:29045480/67‑1 (MQ=255) tcgcccggcggtgatggcgctctctcagtcgctgggcgattttgtcgttgccagcgccgggcGAGCa < 1:16668237‑M2/5‑1 (MQ=255) cGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCa < 1:13882810/67‑1 (MQ=255) ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt < 1:31556911/68‑1 (MQ=255) ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt > 1:25285553/1‑68 (MQ=255) ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt < 1:27676908/68‑1 (MQ=255) ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt > 1:32173924/1‑68 (MQ=255) ggCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCAtt < 1:7329139/68‑1 (MQ=255) cgcccggcggtgatggcgctctctcagtcgctgggcgattttgtcgttgccagcgccgggcGAGCAtt < 1:37498229‑M2/7‑1 (MQ=255) CCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGc < 1:6991325‑M1/68‑1 (MQ=255) CCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCg < 1:9745954‑M1/68‑1 (MQ=255) CCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCg < 1:18193014‑M1/68‑1 (MQ=255) GCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGttt < 1:14818498‑M1/68‑1 (MQ=255) GCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGttt < 1:37793161‑M1/68‑1 (MQ=255) GCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGtt > 1:13644379‑M1/1‑67 (MQ=255) tggcgctctctcagtcgctgggcgattttgtcgttgccagcgccgggcGAGCATTGCGGGTTTTcgc > 1:30248746‑M2/49‑67 (MQ=255) aaCGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTcgcg < 1:26825005/67‑1 (MQ=255) cGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCtt > 1:10592210/1‑68 (MQ=255) cGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCtt < 1:18443715/68‑1 (MQ=255) gACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCttt < 1:2167499/68‑1 (MQ=255) aCAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTc > 1:10114894/1‑68 (MQ=255) cAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCa < 1:35419655/68‑1 (MQ=255) cAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCa < 1:22902041/68‑1 (MQ=255) aTCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCgg > 1:38327757/1‑68 (MQ=255) aTCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCgg > 1:33078710/1‑68 (MQ=255) aTCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCgg > 1:14241024/1‑68 (MQ=255) aTCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCgg < 1:23664819/68‑1 (MQ=255) tCGCCCAGCGAGTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:11562203/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:36354139/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:34100927/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:38411424/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:7156179/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:29396043/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:8731221/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:15705054/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:18672035/68‑1 (MQ=255) tCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGt < 1:17352740/68‑1 (MQ=255) gCCCAGCGACTGAGAGATCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtga < 1:20440610/68‑1 (MQ=255) gCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtga < 1:35716642/68‑1 (MQ=255) gCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtga < 1:29715238/68‑1 (MQ=255) gCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtga < 1:12390378/68‑1 (MQ=255) gCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtga < 1:3133939/68‑1 (MQ=255) tcgctgggcgattttgtcgttgccagcgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGtgat > 1:23932365‑M2/35‑68 (MQ=255) ccAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtgat < 1:14572600/67‑1 (MQ=255) cAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtgatga < 1:20997738/68‑1 (MQ=255) aGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGtgatgat > 1:15467248/1‑68 (MQ=255) aCTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGatgatgatg > 1:31796592/1‑68 (MQ=255) cTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGatgatgatg < 1:20812706/67‑1 (MQ=255) tGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGc > 1:5432542/1‑68 (MQ=255) gagagaGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGGTTTCACCGGTGATGATGATGGCa < 1:2545840/68‑1 (MQ=255) gagagaGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCa < 1:37001324/68‑1 (MQ=255) gagagaGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCa < 1:4041820/68‑1 (MQ=255) gagagaGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGGGATGATGATGGCa < 1:19566090/68‑1 (MQ=255) agagagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCa > 1:1922876/1‑67 (MQ=255) agagagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCa > 1:3078150/1‑67 (MQ=255) agagagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCa > 1:26690189/1‑67 (MQ=255) gagagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCAc < 1:22727295/67‑1 (MQ=255) agagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCa > 1:22149759/1‑68 (MQ=255) agagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCa > 1:119803/1‑68 (MQ=255) agagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCa > 1:13067513/1‑68 (MQ=255) agagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCa > 1:245191/1‑68 (MQ=255) agagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCa > 1:8280613/1‑68 (MQ=255) agagCGCCATCACCGCCGGGCGAGCATTGCGGGGGTTCGCGCTTTCCCGGGTGATGATGATGGCACCa > 1:8990136/1‑68 (MQ=255) gagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAg > 1:428923/1‑68 (MQ=255) gagCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAg > 1:15769663/1‑68 (MQ=255) agCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGa > 1:3596004/1‑68 (MQ=255) gcCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGaa < 1:25057968/66‑1 (MQ=255) gcCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGaa < 1:27313145/66‑1 (MQ=255) gcCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGaa < 1:38171267/66‑1 (MQ=255) gcCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGaa < 1:21271694/66‑1 (MQ=255) ccATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCa > 1:95298/1‑68 (MQ=255) aTCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAAc < 1:9150640/68‑1 (MQ=255) tCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAAc > 1:34436064/1‑67 (MQ=255) tCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACg < 1:10929313/68‑1 (MQ=255) cACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCTAc > 1:18610669/1‑66 (MQ=255) aCCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCt < 1:30363260/68‑1 (MQ=255) ccgccgGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCtt > 1:5061405/1‑68 (MQ=255) cgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCAGCAGAATCAACGCtt > 1:19808945‑M2/9‑67 (MQ=255) cgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCttt < 1:3748104‑M2/60‑1 (MQ=255) cgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCttt < 1:2586171‑M2/60‑1 (MQ=255) cgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCttt < 1:2632363‑M2/60‑1 (MQ=255) cgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCttt < 1:6174394‑M2/60‑1 (MQ=255) cgccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCttt < 1:29965461‑M2/60‑1 (MQ=255) gccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCttt < 1:13821776‑M2/60‑1 (MQ=255) ccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTcc > 1:22324358‑M2/7‑68 (MQ=255) ccgggcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTcc > 1:35241048‑M2/7‑68 (MQ=255) gcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGc > 1:28233868‑M2/3‑67 (MQ=255) gcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGc < 1:17560473‑M2/65‑1 (MQ=255) gcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGc < 1:7927600‑M2/65‑1 (MQ=255) gcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGc < 1:30053069‑M2/65‑1 (MQ=255) gcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGc < 1:9236037‑M2/65‑1 (MQ=255) gcGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGc < 1:33703106‑M2/65‑1 (MQ=255) cGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGCt < 1:5897315‑M2/66‑1 (MQ=255) cGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGCt < 1:3345930‑M2/66‑1 (MQ=255) cGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGCTc > 1:29175585‑M2/2‑68 (MQ=255) | AGGTGCGGCCCGGCGCTGGCAACGACAAAATCGCCCAGCGACTGAGAGAGCGCCATCACCGCCGGGCGAGCATTGCGGGTTTTCGCGCTTTCACCGGTGATGATGATGGCACCAGAATCAACGCTTTCCGGCTC > CP009273/2559867‑2560000 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |