| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3293574 = | 570 (1.200) | 28 (0.070) | 9/90 | NT | 6.2% | coding (250/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein |
| ? | CP009273 | 3293608 = | 387 (1.010) | coding (284/303 nt) | yhbQ | GIY‑YIG nuclease superfamily protein | |||||
Only 100 of 860 total aligned reads displayed.
ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 | aCGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAg < 1:8649307/68‑1 (MQ=255)aCGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAg < 1:6885301/68‑1 (MQ=255)aCGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAg < 1:15173574/68‑1 (MQ=255) gacgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccggg < 1:39613254‑M1/2‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:2036067/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:27808024/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:31191562/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAggg < 1:29286088/68‑1 (MQ=255) gggCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGAGGAAGGCGCAggt > 1:30601426/1‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:35852550‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:38059094‑M1/65‑67 (MQ=255) cgcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgggg > 1:30248064‑M1/65‑67 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:28865634‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:15977358‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:39247642‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:33727707‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:20624929‑M1/64‑68 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt < 1:18688248‑M1/5‑1 (MQ=255) gcgctgaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGtt > 1:365092‑M1/64‑68 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:12827474/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:35381238/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:24548071/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:21366934/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:28042738/67‑1 (MQ=255) ggAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGttt < 1:39057655/67‑1 (MQ=255) tgaatggcgttaccggcctggttgagtatcacgaacatttcaatcgcttttaatctccgGGGTTTGc > 1:23223033‑M1/60‑67 (MQ=255) gaatggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:26967488‑M1/10‑1 (MQ=255) tatCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga < 1:11554621/68‑1 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:20069680‑M1/10‑1 (MQ=255) atggcgttaccggcctggttgagtatcacgagcatttcaatcgcttttaatctccgGGGTTTGCag < 1:6594617‑M1/10‑1 (MQ=255) tCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGGCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGc < 1:32434509/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:27485210/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:33058048/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:34999366/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:7765934/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:17939697/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:19371047/68‑1 (MQ=255) cgcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCAGGTAGCGGAAGGCGCAGGGTTTGCAGAGCt < 1:13922052/68‑1 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAATGCGCAGGGTTTGCaga > 1:25860069/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:22160325/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:13198232/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:614042/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:5928366/1‑64 (MQ=255) gcgTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCaga > 1:18385734/1‑64 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:22650252/1‑68 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:7361049/1‑68 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGtt > 1:34560188/1‑68 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:27137085/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:22439502/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:34309852/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:3733450/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:24066500/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:3476933/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:21798368/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:16299257/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:38372829/67‑1 (MQ=255) gTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGt < 1:36291102/67‑1 (MQ=255) aGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGATTGCAGAGCTGTTAAGc < 1:17488541/68‑1 (MQ=255) gCAACTGCCCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:2369333/1‑68 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:24350684/1‑68 (MQ=255) gCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCa > 1:11170426/1‑68 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAg > 1:3704448/1‑66 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:15344877/68‑1 (MQ=255) aCTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:15724385/68‑1 (MQ=255) aCTCACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTc < 1:22849251/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCt > 1:31628782/1‑67 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:10486337/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:26274393/68‑1 (MQ=255) tGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTg < 1:23055185/68‑1 (MQ=255) aaCGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcc < 1:24962755/68‑1 (MQ=255) cGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAAcccc > 1:558789/1‑68 (MQ=255) cgagcatttcaatcgcttttaatctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:9319347‑M1/40‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:31972646/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:28635995/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:14186785/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:28434512/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:4935968/68‑1 (MQ=255) aaaaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGgaga < 1:17040136/68‑1 (MQ=255) aaGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:4396895/1‑68 (MQ=255) aaGAGCGCCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGAtt > 1:29692102/1‑68 (MQ=255) gagCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTaa > 1:10798564/1‑68 (MQ=255) tGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGAt < 1:19786161/68‑1 (MQ=255) tGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGAt < 1:8220843/68‑1 (MQ=255) gTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTg > 1:18985172/1‑68 (MQ=255) ggAAGGCGCAGGGGTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAAt < 1:35648219/67‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc > 1:3392261/1‑67 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:10123940/67‑1 (MQ=255) aaGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGc < 1:16589700/67‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:37709048‑M1/62‑1 (MQ=255) tctccgGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg < 1:20955151‑M1/62‑1 (MQ=255) ggCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCg > 1:25308486/1‑68 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:5239683/67‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:36003250/67‑1 (MQ=255) cgcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGt < 1:299278/67‑1 (MQ=255) gcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTg < 1:1262256/67‑1 (MQ=255) gcAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGa > 1:32717501/1‑68 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:14803590/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:12266007/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:11839135/67‑1 (MQ=255) aGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAt < 1:30770072/67‑1 (MQ=255) | ACGGGCGGAATATCGCGTTAAGCAACTGACCAAACGGCAAAAAGAGCGTCTGGTAGCGGAAGGCGCAGGGTTTGCAGAGCTGTTAAGCAGTCTGCAAACCCCGGAGATTAAAAGCGATTGAAATGCTCGTGAT > CP009273/3293507‑3293639 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |