| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 442683 | 373 (0.790) | 42 (0.110) | 15/90 | NT | 10.4% | coding (479/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | = 442722 | 422 (1.110) | coding (440/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 810 total aligned reads displayed.
GAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCT > CP009273/442655‑442789 | gAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACcg < 1:11530322/68‑1 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGCTCACCGgcg < 1:9136233‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:21727316‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:27665722‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:7858327‑M2/68‑4 (MQ=255) gATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcg < 1:34285379‑M2/68‑4 (MQ=255) ggttcgctctccggcgctggGCCGCTATCGCACTCACCGGTTACCGCGCTGTTGCCGATCACcggcg < 1:13828471‑M1/47‑1 (MQ=255) aTAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCCgcg < 1:38356892‑M2/67‑4 (MQ=255) tAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggc > 1:30448839‑M2/1‑63 (MQ=255) gCCAGCAGGATCGCTGCGCCGCTATCGATCTCCCAGGTTACCGCACAGTAGCCGATCACCGgcggcg < 1:23508803‑M2/67‑7 (MQ=255) gCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCCCAGTAGCCGATCACCGgcggcgc < 1:11056397‑M2/68‑8 (MQ=255) ccAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgca < 1:35037734‑M2/68‑9 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcg > 1:28245688‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:8346047‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:15041301‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:37737300‑M2/1‑55 (MQ=255) agGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc > 1:6887496/1‑68 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:18250080/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGcc < 1:4669858/65‑1 (MQ=255) aTCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGga > 1:29804059/1‑68 (MQ=255) tCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgag < 1:2733724/68‑1 (MQ=255) tCGCTGCGCCGCTAACGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgag < 1:31744255/68‑1 (MQ=255) gCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgag < 1:18879917‑M1/67‑1 (MQ=255) CGCTGCGCCGCTATCGAACTCAGCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:10062375‑M1/1‑68 (MQ=255) CGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGgaga > 1:8770440‑M1/1‑68 (MQ=255) TGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGCGAGCg < 1:31425095‑M1/68‑1 (MQ=255) gcgcCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcgatcctgctggc > 1:30617572‑M2/1‑46 (MQ=255) GCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGa > 1:20505838‑M1/1‑68 (MQ=255) cgcTATCGAACTCACCGGTTACCGCACAGTAGCCGATCCCCGgcggcgcagcgatcctgctggctatc > 1:22858659‑M2/1‑42 (MQ=255) CGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCa < 1:24053234‑M1/68‑1 (MQ=255) GCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCaa > 1:12228605‑M1/1‑68 (MQ=255) GCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCaa > 1:16748935‑M1/1‑68 (MQ=255) tCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagc > 1:7538063‑M2/1‑37 (MQ=255) tCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCaa < 1:39073609/68‑1 (MQ=255) cGAACTCACCGGTTACCGCACTGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAAc < 1:4162227/68‑1 (MQ=255) cGAACTCACCGGTTACCGCACCGTAGCCGATCACCGgcggcgcagcgatcctgctggctatcttcagc > 1:10813494‑M2/1‑36 (MQ=255) cGAACTCACCGGTTACAGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAAGCagc > 1:5401944/1‑66 (MQ=255) cGAACACACCGGTTACCGCACAGTAGCCGATCACCGgcggcgcagcgatcctgctggctatcttcagc > 1:20043010‑M2/1‑36 (MQ=255) aaCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt > 1:13331612/1‑68 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATGAACGt > 1:16534503/1‑67 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt > 1:13486666/1‑67 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt < 1:34819220/67‑1 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt > 1:15611469/1‑67 (MQ=255) aCTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGt > 1:6404793/1‑67 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:37451090/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:33014573/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:4989078/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:4437725/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:32162986/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:7300845/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:19714860/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:22326756/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:20925949/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:20760698/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:9338710/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:24490704/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:36196721/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:25924483/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:26354119/68‑1 (MQ=255) cTCACCGGTTACCGCACAGTAGCCGAGCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:25450644/68‑1 (MQ=255) tCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGcc > 1:39524401/1‑68 (MQ=255) ccGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTa < 1:27959706/68‑1 (MQ=255) cGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAg < 1:7074703/68‑1 (MQ=255) cacaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGCACCAATCAACGTGCCGTAGACAGAGTg > 1:6012721/1‑67 (MQ=255) cacaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTg > 1:28749612/1‑67 (MQ=255) cacaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAAACAATCAACGTGCCGTAGACAGAGTg > 1:36562938/1‑67 (MQ=255) acaGTAGCCGATCACCGgcggcgcagcgatcctgctggctatcttcagcctgtggcagatgcctcact > 1:12925037‑M2/1‑17 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc < 1:9652810/68‑1 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc > 1:32392323/1‑68 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc > 1:570514/1‑68 (MQ=255) acaGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGc < 1:30128928/68‑1 (MQ=255) aGCCGATCACCGGCTGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:38637112/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGttt < 1:12549651/67‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGt < 1:14404488/65‑1 (MQ=255) aGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGt < 1:11968056/65‑1 (MQ=255) ccGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGc < 1:14631990/46‑1 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCa < 1:17647383/66‑1 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCTTg > 1:37060921/1‑68 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCAt < 1:22110231/67‑1 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCAt < 1:29084306/67‑1 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCAt < 1:29455668/67‑1 (MQ=255) cGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATg < 1:15292321/68‑1 (MQ=255) gATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGt < 1:35657374/68‑1 (MQ=255) aTCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGt > 1:19109197/1‑67 (MQ=255) cACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACa < 1:33976163/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACATAGTGGCGTTTCATGTACAgg < 1:14031922/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:21433690/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:23699601/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:1132855/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:11796549/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:2490655/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:26897286/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:19424981/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:17916556/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:17195694/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:16376379/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:32747662/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:33593960/68‑1 (MQ=255) ccGGCGGCGCAGCGCCGGAAAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAgg < 1:25193202/68‑1 (MQ=255) cggcggCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGc < 1:15978991/68‑1 (MQ=255) | GAAGATAGCCAGCAGGATCGCTGCGCCGCTATCGAACTCACCGGTTACCGCACAGTAGCCGATCACCGGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCT > CP009273/442655‑442789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |