| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 304 (0.640) | 48 (0.130) | 22/84 | NT | 17.5% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 224 (0.630) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 436 total aligned reads displayed.
AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAC > CP009273/3630132‑3630264 | aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCa > 1:26963333/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCa > 1:11769528/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCa > 1:9264768/1‑68 (MQ=255) cACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAga > 1:5941372‑M2/1‑65 (MQ=255) cACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGA < 1:1846193‑M1/67‑1 (MQ=255) cACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAG < 1:11172168‑M1/66‑1 (MQ=255) aCCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACC < 1:1879347‑M1/68‑1 (MQ=255) cGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCG < 1:36770934‑M1/68‑1 (MQ=255) gCCACGCCCGCCCGCACCTGTAACTCTTCCGGCGGCGGTTTATGCAGGGTGAA‑AGGCCCCAGACCggc > 1:30235575/1‑68 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAAATGGCACCAgaccc < 1:38805526‑M2/67‑6 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgc > 1:3072022‑M2/1‑61 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgc < 1:8309173‑M2/68‑8 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgc > 1:34931063‑M2/1‑61 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGC > 1:8853020‑M1/1‑68 (MQ=255) gcccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgcgcggg < 1:14385925‑M2/68‑13 (MQ=255) gcccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGG > 1:26279375‑M1/1‑68 (MQ=255) cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCtggt < 1:1331079‑M1/68‑5 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGgcagc > 1:21209659/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgccccgcgcgggtctggtgcca < 1:8888735‑M2/68‑23 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgcgcgggtctggtgcca > 1:36497171‑M2/1‑46 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:14474035/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:10901269/1‑68 (MQ=255) aCTCTTCGAGCGACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:37191741/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgcgcgggtctggtgccattcac < 1:23389432‑M2/66‑28 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgcgcgggtctggtgccattcac < 1:29570575‑M2/66‑28 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:3985184/1‑67 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:20128605/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGGGGGTCtggtgccagtcac > 1:1081647‑M1/1‑52 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCgggtgcgattcac > 1:10009683‑M1/1‑52 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:23160532/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:34000133/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:14265557/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:4249091/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAgacccgcgcgggtctggtgccattcactctg > 1:29290154‑M2/1‑37 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:37517674/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGACTGAA‑TGGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:10320857‑M1/68‑19 (MQ=255) ctTCGACCAACGGTTTATCCAGAGTCAA‑TGCCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:10276282‑M1/68‑19 (MQ=255) ctTCGACCAACGGTTTATCCAGAGGGAA‑TGGCACCAgacccgcgcgggtctggtgccattcactctgc > 1:286998‑M2/1‑36 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:12973213/1‑68 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:25276172/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:17313531/1‑68 (MQ=255) gCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:30905915/1‑68 (MQ=255) gTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCa > 1:16362820/1‑68 (MQ=255) tATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATc < 1:6770448/68‑1 (MQ=255) aTGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:35574653/68‑1 (MQ=255) tGCAGAGTGAA‑TGGCACCAGGCCCGCGCGGGTCgggtgcggttcactcggcataaaccgttggtcgaa > 1:10620028‑M1/1‑33 (MQ=255) tGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:20874573/1‑68 (MQ=255) tGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:8622634/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaag < 1:34176232‑M2/68‑51 (MQ=255) gCAGAGTGAA‑TGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaag < 1:16179858‑M2/68‑51 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCCGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:1491383/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:21069631/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:29224695/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:7317537/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:29703672/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:15024720/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:33309914/1‑68 (MQ=255) gCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:31613797/1‑68 (MQ=255) cAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:28402082/1‑68 (MQ=255) cAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:6532520/1‑68 (MQ=255) cAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:7049429/1‑68 (MQ=255) cAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:32670132/1‑68 (MQ=255) agagTGAA‑TGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaaga > 1:19370518‑M2/1‑16 (MQ=255) agTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATaa > 1:23650878/1‑67 (MQ=255) gtcaa‑tggCACCACACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagag < 1:31819379‑M1/62‑39 (MQ=255) gTGAA‑TGGCACCAGCCCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagt < 1:37751905‑M1/66‑40 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgtggctcgaagagtt > 1:39255506‑M1/1‑27 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccggtgctcgcagagtt > 1:5393703‑M1/1‑27 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGGCAAATTGTTCGGCAATCTTATAAcc > 1:15832918/1‑68 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:1223447/1‑68 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:13607135/1‑68 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:27583030/1‑68 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:17605434/1‑68 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:5132749/1‑68 (MQ=255) gTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:32413816/1‑68 (MQ=255) a‑TGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacagg < 1:33011439‑M1/68‑46 (MQ=255) tGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:38129606‑M2/68‑61 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttggtcgtagagttacaggt > 1:18642426‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:9664439‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:32949062‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:28036758/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:25654109/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:35719745/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:23825215/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:38953865/1‑68 (MQ=255) gCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:3129906‑M2/66‑61 (MQ=255) gCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:22506693‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:230577‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:23967894/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:24513824/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:19150849/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:25088605/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:15388428/1‑68 (MQ=255) aCCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg < 1:37947280‑M2/68‑65 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactgtggataatccgttgctggaagaggtacaggtgcgg > 1:12138095‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:36305392/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:12561210/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:21832955/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:38367167/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:37447485/1‑67 (MQ=255) | AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAA‑TGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAC > CP009273/3630132‑3630264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |