| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 442673 = | 388 (0.930) | 28 (0.080) | 9/90 | NT | 6.9% | coding (489/891 nt) | cyoE | protoheme IX farnesyltransferase |
| ? | CP009273 | 442734 = | 441 (1.320) | coding (428/891 nt) | cyoE | protoheme IX farnesyltransferase | |||||
Only 100 of 147 total aligned reads displayed.
TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:25967693/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC < 1:21180962/68‑1TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:33554203/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:33868053/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:20400007/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:382140/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:2977676/1‑68TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGC > 1:1536614/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:9004882/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:1875130/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:1710319/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:16812894/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:14808751/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:31644166/1‑68 TGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGATCGATAGCG > 1:346589/1‑68 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:14613985/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:28494311/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:4567485/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:20782998/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCG > 1:29201692/1‑67 GGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGCGCGGTAACCGGTGAGTTCGATAGCG > 1:32270864/1‑67 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:14122770/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:4261894/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:16426114/67‑1 TTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGC < 1:12093050/67‑1 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:31336495/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:30302470/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:1622799/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:14732609/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:23070085/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:23246055/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:24450303/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:28003842/1‑68 TCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGC > 1:25786631/1‑68 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:22252645/68‑1 CGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCA < 1:26846783/68‑1 GCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAG < 1:21856219/68‑1 gCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:33423669/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:20357207/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:32562387/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:34421466/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:5827602/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:8547431/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG > 1:27956514/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG < 1:2652321/68‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:22220140/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:3898187/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:11601925/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGC < 1:8170219/67‑1 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGAGAGCGGCGCAGCG > 1:24975114/1‑68 TCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGAAAGCGGCGCAGC < 1:4482521/67‑1 TCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGC < 1:10007112/67‑1 CGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGG < 1:4802835/68‑1 TGCGCCGCCGGTGATCGGCTACTGGGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGC < 1:9652666/67‑1 CGCCCCCGGTGATCGGCTACTGTGCGGAAACCGGTGAGTTCGATCGCGGCGCAGCGCCGGAGAGCGA < 1:29266552/67‑1 CGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACC < 1:17297858/67‑1 CGCCGGTGACCGGCCACTGTGCGGTAACCGGTCAGTTCGACAGCGGCGCAGCGCCGGAGAGCGAACC < 1:31405734/67‑1 CGCCGGGGATGGGCTACTGGGCCGTAACCGGTGAGGGCGATAGCGGCGCAGCGCCGGAGAGCGAACC < 1:16751337/67‑1 GCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAA > 1:493893/1‑68 GCCGGTGATCGGCTACTGCGCGGTAACCGGGGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAA < 1:4804401/68‑1 CGGCTCCTGTGCGGTACCCGGGGCGTCCGATAGCCGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:6567666/68‑1 CGGCTACTGTGCGGTAACCGGTGCGTTCGATCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:13233369/68‑1 CGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCGATCAACGTGC < 1:10005180/68‑1 CGGCTACTGTGCGGCAACCGGCGAGTGCGATCGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:6220967/68‑1 CGGCGACCGTGCGGTACCCGGGGAGTTCGATCGCGGCCCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:11131854/68‑1 GGCTCCGGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:25334029/67‑1 GGCTACTGGGCGGTAACCGGCCCGTGCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGC < 1:19647527/67‑1 ACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAG < 1:9042300/68‑1 GCGGTAACCGGCGAGTTCGATAGCCGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGA < 1:3436559/68‑1 TAGCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGG < 1:9284607/67‑1 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGCGTGGCGTTTCATGTACAGGCTA > 1:13984725/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:5370807/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:12085643/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:27290050/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:26436054/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:22055430/1‑68 GCGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA > 1:20742922/1‑68 CGGCGCAGCGCCTTAGAGCGAACCAATCAACGTGCCGTACACAGAGTGGCGTTTCATGTACAGGCTA < 1:22060306/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:17999904/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:2964622/67‑1 CGGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTA < 1:5540670/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGAGTGAGTGGCGTTTCATGTACAGGCTAT < 1:110370/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:26634491/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:17958253/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:28135799/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:416721/67‑1 GGCGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTAT < 1:7194056/67‑1 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAA > 1:12866097/1‑67 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAA > 1:22916170/1‑67 CGCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAA > 1:30022545/1‑67 GCAGCGCCGGAGCGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGGTTCATGTACCGGCTATAAcc > 1:13433451/1‑66 GCAGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAAC < 1:19381942/68‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:32825032/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:21508919/67‑1 AGCGCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACG < 1:31335006/67‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:15756298/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:7200837/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:15799853/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA < 1:1815536/68‑1 GCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCG > 1:6488610/1‑67 TTGGTTCGCTCTCCGGCGCTGCGCCGCCGGTGATCGGCTACTGTGCGGTAACCGGTGAGTTCGATAGCGGCGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/442749‑442673‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcgcagcgCCGGAGAGCGAACCAATCAACGTGCCGTAGACAGAGTGGCGTTTCATGTACAGGCTATAAACGCCGA > CP009273/442734‑442800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |