| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1092949 = | NA (NA) | 19 (0.050) | 6/100 | NT | 22.1% | intergenic (+664/+72) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| ? | CP009273 | 1093045 = | 75 (0.180) | noncoding (64/88 nt) | serX | tRNA‑Ser | |||||
Only 100 of 245 total aligned reads displayed.
AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGccccga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1093015‑1092949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCG > CP009273/1093045‑1093117 AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:30821279/68‑1AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:20775215/68‑1AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:11472961/68‑1AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:201965/68‑1AAAGAAGAGCGCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC < 1:23952367/68‑1 AAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATCTTGCACACACCGGGGGGATGAGAAGCC < 1:23417446/68‑1 AAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC < 1:33521139/68‑1 AGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC > 1:21909212/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAAGCC > 1:7666854/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:12445486/68‑1 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:22101163/68‑1 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:34627513/68‑1 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:26755178/68‑1 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC < 1:15763369/68‑1 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:17878592/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:5706159/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:11357157/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:5048819/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:16427913/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:15795208/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACAAACCGGGGGGATGAGAAGCC > 1:8733561/1‑67 AGAAGAGCTCGTACGAAAGTACGGGC‑‑TTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9025168/1‑68 gagGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:30691430/4‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:27193146/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:26621076/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:26534864/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:26506863/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:26129121/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:28748573/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:2505385/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:25800419/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:303870/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:8868788/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:33045471/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:33420152/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:33606038/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:34057664/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:34263112/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:3685296/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:4730977/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:5155844/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:6493634/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:6801990/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:7401329/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:7916198/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:8107453/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:8371185/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9585438/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:11958493/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:11648135/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:13217139/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:13619851/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:13634875/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:14320831/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:15890645/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:25609408/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:18226024/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:24225358/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:9228074/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:21416285/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:21350750/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC > 1:5359877/1‑66 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGCAGCAGAAGCCCC > 1:24800269/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTAAATTGCACACACCGGGGGGATGAGAAGCCCC > 1:4372403/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTAGTATATTTCACACACCGGGGGGATGAGAAGCCCC > 1:31982502/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTACGAATATTGCAAACACCTGGGGGATGAGAAGCCac > 1:2003182/1‑66 GAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTCTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:15045738/1‑68 GAAGAGCTCGTACGAAAGTACGGGC‑TTTGTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC > 1:13273906/1‑68 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:17406416/68‑1 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:34737969/68‑1 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:29217843/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:10005988/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:556102/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:16973650/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:2834110/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:18750715/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:19220856/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:19344517/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG > 1:10650006/1‑67 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCC < 1:10290823/66‑1 AGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAGGAGAAGCCCCG < 1:20650901/67‑1 AGAGCGCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:14624555/68‑1 AGAGCGCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:15347345/67‑1 AGAGCGCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCG < 1:31570319/67‑1 GCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA < 1:31671437/65‑1 acCGAAAGTCCGGGC‑TTTTTTTTCGAATATTGCACACCCCGGGGGGAGGAGAAGCCCCGATACGTTGC < 1:3999114/66‑1 TACGAACGTACGGGC‑TTTTTTTTCGTATATTGCCCACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:16642801/68‑1 ACGAACGTACGGGC‑TTTTTTTTCGTATATAGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:22956950/67‑1 ACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:32961766/67‑1 ACGAAAGTACGGGC‑TTTTTTTTCGTAAATTGCACACACCGGGGGGATGAGAAGCCCCGATACGTTGC < 1:11076516/67‑1 TTTTTTTTCCTATATTCCACACACCGGGGGCATGAGAAGCCCCGATACGTTGCCGTATACACACTTT < 1:29725580/67‑1 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT > 1:9362043/1‑68 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT < 1:10121160/68‑1 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT > 1:3240136/1‑68 CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAAT > 1:27437210/1‑68 CCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATT > 1:7954631/1‑68 CCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTG < 1:12241704/68‑1 CCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTG > 1:9714734/1‑68 GATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC < 1:22447035/68‑1 GATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTC < 1:10872158/68‑1 AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGccccga‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1093015‑1092949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCG > CP009273/1093045‑1093117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |