| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3202572 | 259 (0.620) | 17 (0.050) | 6/92 | NT | 8.8% | coding (1190/1464 nt) | ttdT | L‑tartrate/succinate antiporte |
| ? | CP009273 | = 3202615 | 140 (0.410) | coding (1233/1464 nt) | ttdT | L‑tartrate/succinate antiporte | |||||
CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202498‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG < CP009273/3202615‑3202550 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:28126386/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:23837363/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:12932598/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:28657788/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:21679468/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:15239676/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:28689741/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:29121771/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:7382991/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:30967274/1‑67CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTC > 1:32664445/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:11709645/1‑67 GGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:16681762/1‑67 GGTTATTCGACAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCG > 1:13590440/1‑67 ATTCGCCAACGTTGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:25093069/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTTGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:20833963/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTTGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:15990942/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:32268397/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:16203709/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:22144615/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:13296481/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:12093310/68‑1 ATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC < 1:27456207/68‑1 TTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC > 1:8187515/1‑67 TTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGC > 1:12186429/1‑67 TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC < 1:34784885/68‑1 TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCG > 1:19525618/1‑67 TCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCG > 1:19874522/1‑67 ACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGC < 1:20346458/68‑1 GGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGG < 1:9009591/68‑1 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCATTCATCATCGGTGGGAGAGGGGAGGTATACGCCGT > 1:25343736/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCCTCGGTGCGAGCGCGGAGGTTTACGCCGT > 1:32597429/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGCGCGGAGGTATACGCCGT > 1:25808882/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:26430661/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:31905166/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:29509789/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:6424105/1‑68 CTACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGT > 1:21403713/1‑68 ACTGCGCTACTTTTTCGCCAGCGGCGCAGCAATCGTCATCGGTGCGAGAGCGGAGGTTTACGCCGTG > 1:5654136/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGCGCGGAGGTATACGCCGTG > 1:31521008/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:30550132/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:15069743/1‑67 ACTGCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTG > 1:18648286/1‑67 GCGCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGC > 1:18461028/1‑66 GCTACTTTTTCGCCAGCGCAGCAGCAATCATCATCGGTGCGCGAGCGGAGGTATACGCCGTGGCGCTG > 1:4654529/1‑68 TTTTTCGCCAGCGCAGCAGCAATCATCTTCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAA > 1:1894842/1‑68 CGCCAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGT > 1:28406210/1‑68 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGC < 1:23087321/68‑1 CAGCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGC < 1:30912180/68‑1 GCGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCGGGCGAATAAGTAGCGC > 1:32072520/1‑68 CGCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCA > 1:24914632/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:11889426/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:33282915/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:32770658/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:19726309/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:20084473/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:2012604/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:24623990/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:24803541/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG > 1:27088810/1‑68 GCAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGC < 1:29081139/66‑1 CGGTTATTCGCCAACGATGGTGATGGTGGCGTTGATTGTGGTGTTTTATCTACTGCGCTACTTTTTCGCCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3202498‑3202572‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgccagcgcAGCAGCAATCATCATCGGTGCGAGAGCGGAGGTATACGCCGTGGCGCTGGCGAAAAAGTAGCGCAG < CP009273/3202615‑3202550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |