| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3693271 | 256 (0.610) | 14 (0.040) | 7/94 | NT | 5.7% | intergenic (+18/+69) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small |
| ? | CP009273 | = 3693281 | 250 (0.710) | intergenic (+28/+59) | bcsG/ldrD | DUF3260 family inner membrane protein associated with cellulose production/toxic polypeptide, small | |||||
Only 100 of 154 total aligned reads displayed.
CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3693196‑3693271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgcagGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG < CP009273/3693281‑3693215 CCAGGATAAACCGTACGTTCGCCTGAAGGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:23418388/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCGTTACCCGCAGTAAGAACGAAAAA > 1:23338311/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:7844692/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:1073276/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:30598538/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:25432726/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:25080767/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:20649316/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:17982809/1‑68CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:13563404/1‑68CCAGGATAAACCGTACGTTCGACTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:9856604/1‑68CCAGGATAAACCGCACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAA > 1:5270826/1‑68 AGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAG > 1:6925885/1‑67 GATAAACCGTACGTTCGCCTGAACGGCGGCGCCTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:25729350/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:1858003/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:9281672/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:22579705/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:31382940/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:31784323/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:13168696/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:15557871/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:3197533/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:33384260/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:16765641/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:34375676/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:12155638/1‑68 GATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:7721968/1‑68 GATAAACCGTACGTTCGCCGGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGgc > 1:23943489/1‑66 cTAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGC < 1:15413015/65‑1 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:14221355/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:20581894/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:23560774/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:239531/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:29376671/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:29600583/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:66979/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:8145022/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:17550309/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:6978305/1‑67 ATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCC > 1:6653712/1‑67 GGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTT > 1:15097076/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGgta > 1:26249082/1‑65 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:15064890/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:10720345/1‑68 CCGCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAA > 1:25791888/1‑68 GCAGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCGTTTTCGTTCTTACTGCGGGTAAG > 1:10189192/1‑67 AGTAAGAACGAAAAAGGCCGCAGGGGGGAAACTATGCGGCCTTTTTAGTTCTTACTGCGGGTAAGGC > 1:11922021/1‑67 AACGAAAAAGGCCGCAGGGGGGAACCTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAG > 1:12767741/1‑67 AACGAAAAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAG > 1:22167350/1‑67 AAAGGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCG > 1:33483329/1‑67 GGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:31409881/1‑68 GGCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGGTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:8913728/1‑68 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:8554834/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:27736163/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:1152862/1‑67 GCCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT > 1:12980357/1‑67 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTACGGCACCCAGTCGCCGCCGT < 1:4658610/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:10408/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:30136851/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:31782529/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:4293663/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:4596252/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:5305418/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:10891399/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:15929495/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:19072890/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:19734391/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:1975227/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:22737820/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:1861357/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:16597703/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:2677234/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:27444600/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:27532187/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:28717732/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:29313499/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTC > 1:2996025/1‑68 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:14315346/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:30301168/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:13612802/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:727455/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:10889832/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:26334503/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:5333966/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:23045729/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:24840285/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGT < 1:33524870/66‑1 CCGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCG < 1:17651347/65‑1 CGCAGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCA < 1:19664964/68‑1 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGC > 1:27024727/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGC > 1:923258/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGC > 1:15403811/1‑68 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGG < 1:19511518/67‑1 AGGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGG < 1:9331692/67‑1 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCCCCCAGTCGCCGCCGTTCAGGC > 1:5518382/1‑67 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:8244308/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:840573/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:11972592/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:17253425/1‑68 GGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG > 1:6031596/1‑68 CCAGGATAAACCGTACGTTCGCCTGAACGGCGGCGACTGGGTGCCTTACCCGCAGTAAGAACGAAAAAGGCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3693196‑3693271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccgcagGGGGGAAACTCTGCGGCCTTTTTCGTTCTTACTGCGGGTAAGGCACCCAGTCGCCGCCGTTCAGGCG < CP009273/3693281‑3693215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |