| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 253 | 318 (0.760) | 19 (0.060) | 11/92 | NT | 5.4% | coding (64/66 nt) | thrL | thr operon leader peptide |
| ? | CP009273 | = 278 | 400 (1.170) | intergenic (+23/‑59) | thrL/thrA | thr operon leader peptide/Bifunctional aspartokinase/homoserine dehydrogenase 1 | |||||
Only 100 of 807 total aligned reads displayed.
ATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAGG > CP009273/186‑320 | ccATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGa < 1:26409060/68‑1 (MQ=255) cATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGAc > 1:26260352/1‑68 (MQ=255) tGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGAcgc < 1:32383613/68‑1 (MQ=255) aaCGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGt < 1:12665944/67‑1 (MQ=255) aaCGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGt > 1:28967971/1‑67 (MQ=255) aCGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAc > 1:17906306/1‑68 (MQ=255) aCGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTAc > 1:20066587/1‑68 (MQ=255) cGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACa > 1:28029741/1‑68 (MQ=255) gCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAg < 1:10178175/68‑1 (MQ=255) gCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAac > 1:19251764/1‑67 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 1:11279509/1‑68 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 1:9507392/1‑68 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 1:12430412/1‑68 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 1:13824083/1‑68 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 1:7774008/1‑68 (MQ=255) accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAAcaca > 1:6145992/1‑68 (MQ=255) caTTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGaaaa > 1:11565643/1‑68 (MQ=255) tACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGATACACAGAAAAAa < 1:11090033‑M2/67‑2 (MQ=255) tACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAag > 1:9796845‑M2/1‑66 (MQ=255) tACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAa < 1:4477526‑M2/67‑2 (MQ=255) ccaccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagc < 1:17146694‑M2/67‑4 (MQ=255) caccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagccc < 1:20566785‑M2/68‑6 (MQ=255) caccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagccc < 1:21076418‑M2/68‑6 (MQ=255) caccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagccc < 1:22974373‑M2/68‑6 (MQ=255) caccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagccc < 1:22295633‑M2/68‑6 (MQ=255) caccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagccc < 1:3864936‑M2/68‑6 (MQ=255) caccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagccc < 1:537097‑M2/68‑6 (MQ=255) ccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgc > 1:33951510‑M2/1‑61 (MQ=255) ccaccaTCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgc > 1:14461839‑M2/1‑61 (MQ=255) accatcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgcac > 1:23439206‑M2/1‑59 (MQ=255) accatcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgca < 1:4861945‑M2/67‑9 (MQ=255) catcaccatTACCACAGGTAACTGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgcaccg > 1:10849889‑M2/1‑57 (MQ=255) catcaccatTACCACAGGTAACGGTGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccg > 1:25530086‑M1/1‑32 (MQ=255) catcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgca < 1:8692555‑M2/65‑9 (MQ=255) catcaccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCt < 1:30477272/68‑1 (MQ=255) accatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACa > 1:2253560/1‑68 (MQ=255) ccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAg > 1:29343048/1‑68 (MQ=255) ccatTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAg > 1:11821284/1‑68 (MQ=255) catTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGt < 1:32902420/68‑1 (MQ=255) catTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGt > 1:8088507/1‑68 (MQ=255) catTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGt < 1:24507597/68‑1 (MQ=255) tACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAagcccgcaccgttacctgtg > 1:18286266‑M2/1‑48 (MQ=255) aCCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGCCAGTGCgg > 1:32214930/1‑68 (MQ=255) ccACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCggg < 1:25642803/68‑1 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCCCCTGACAGTGCgg > 1:3438436/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:22138017/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:27453724/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:25886369/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:16944689/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:15252648/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:31291267/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:733959/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCgg > 1:2282920/1‑66 (MQ=255) cacaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGc < 1:27004097/68‑1 (MQ=255) acaGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCt > 1:15889329/1‑68 (MQ=255) gTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCttttt > 1:5470461/1‑68 (MQ=255) gTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCtgttt > 1:14002752/1‑68 (MQ=255) aCGGTGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgat > 1:174051‑M1/1‑12 (MQ=255) cGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCtttttttt > 1:32757991/1‑67 (MQ=255) cGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCtttttttt > 1:25293401/1‑67 (MQ=255) gTGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggt > 1:26013635‑M1/1‑9 (MQ=255) gTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCg > 1:19567488/1‑68 (MQ=255) gTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCg > 1:33325477/1‑68 (MQ=255) tGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtg > 1:10761373‑M1/1‑8 (MQ=255) tGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggt < 1:24692139‑M1/67‑60 (MQ=255) tGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggt < 1:3001147‑M1/67‑60 (MQ=255) tGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatgg < 1:4244200‑M1/66‑59 (MQ=255) tGCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatg < 1:26726254‑M1/65‑58 (MQ=255) tGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCg > 1:7046832/1‑67 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg < 1:34808522‑M1/68‑62 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:21810117‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:33721894‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:15182584‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:32028754‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:31736155‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg < 1:31896333‑M1/68‑62 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:23680709‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg > 1:24070131‑M1/1‑7 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtg < 1:21630810‑M1/67‑61 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtg < 1:20913115‑M1/67‑61 (MQ=255) gCGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacatgtggtaatgctgatggtgg < 1:15550339‑M1/68‑62 (MQ=255) gCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGa < 1:15753309/67‑1 (MQ=255) gCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGa > 1:14927974/1‑67 (MQ=255) gCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGC‑TTTTTTTTCGAcc > 1:16315517/1‑68 (MQ=255) cGGGCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtgg < 1:28347524‑M1/67‑62 (MQ=255) gggCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtg < 1:33495869‑M1/68‑64 (MQ=255) gggCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtg < 1:3083678‑M1/68‑64 (MQ=255) gggCTtttttctgtgtttcctgtacgcggcagcccgcaccgttacctgtggtaatggtgatggtggtg < 1:13478‑M1/68‑64 (MQ=255) ggCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtgg > 1:17583458‑M1/1‑4 (MQ=255) gCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtgg < 1:9104895‑M1/67‑65 (MQ=255) gCTtttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtgg < 1:25018773‑M1/67‑65 (MQ=255) cTGCCGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg > 1:23232545/1‑68 (MQ=255) cTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg > 1:16613461/1‑68 (MQ=255) cTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg > 1:13126918/1‑68 (MQ=255) cTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg > 1:2426684/1‑68 (MQ=255) cTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg > 1:18792693/1‑68 (MQ=255) cTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg > 1:28601674/1‑68 (MQ=255) ttttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtggta < 1:16044546‑M1/67‑67 (MQ=255) ttttttctgtgtttcctgtacgcgtcagcccgcaccgttacctgtggtaatggtgatggtggtggta < 1:20340840‑M1/67‑67 (MQ=255) tGACGCGTACAGGAAACACAGAAAAAACCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAg < 1:12197464/67‑1 (MQ=255) | ATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCGACCAAAGG > CP009273/186‑320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |