| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 64557 | 324 (0.780) | 18 (0.050) | 10/94 | NT | 5.6% | coding (1224/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 64577 | 332 (0.950) | coding (1204/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 616 total aligned reads displayed.
AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAT > CP009273/64490‑64624 | aGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGC < 1:930138‑M1/68‑1 (MQ=255) ggTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGcc > 1:8454419/1‑68 (MQ=255) ggTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGcc > 1:2177646/1‑68 (MQ=255) gCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTg > 1:20852420/1‑68 (MQ=255) gCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTg > 1:3383301/1‑68 (MQ=255) gCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTg > 1:22731459/1‑68 (MQ=255) atgatCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAAt > 1:7260740/1‑67 (MQ=255) cGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCa < 1:14936008/68‑1 (MQ=255) gACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCAc > 1:17202726/1‑68 (MQ=255) ggTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTa > 1:10569944/1‑67 (MQ=255) ggTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTa > 1:661293/1‑67 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc < 1:22026395/67‑1 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc < 1:15560546/67‑1 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc < 1:694787/67‑1 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCg > 1:19085169‑M2/1‑67 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCg > 1:11359208‑M2/1‑67 (MQ=255) gCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccag < 1:16206895‑M2/68‑6 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCTCGTAGCCgccagg < 1:22212954‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:26451820‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:34716266‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:27056595‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:32560506‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:5041571‑M2/68‑7 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccaggg > 1:23123199‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccaggg > 1:11890338‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:15949161‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:33042607‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:30687432‑M2/1‑61 (MQ=255) tttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggc > 1:5392517‑M2/1‑60 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:20246826/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:5351487/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:570209/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:17633411/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:13731908/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:14750644/1‑67 (MQ=255) ataGTCCAGCACCAGAACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:10002732/1‑67 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:28690706/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:13316335/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:2634406/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:25635382/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:3543071/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:8765599/1‑68 (MQ=255) tCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGt > 1:33636585/1‑67 (MQ=255) ccagcaccagcaCTGAATCATAACGCCCTGGCCGTGACTCCATCACGTAGCCgccagggctttatgat > 1:9542313‑M2/1‑52 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCTGCCAGGGCTGGCGTgc > 1:24202565/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:2387284/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:31511701/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:19603677/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCCCCAGGGCTGGCGGgc > 1:21010993/1‑68 (MQ=255) accagcacTGAATCATAAAGCCCTGGCggctacgtgatgggttcccggccagggcgttttgagtgagt > 1:29707427‑M1/1‑27 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgattcagt > 1:13428941‑M2/1‑47 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:3818247/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:31032780/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:26569387/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:32126062/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:4539789/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:15150982/1‑67 (MQ=255) ccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCggcggc < 1:27602888/68‑1 (MQ=255) cacTGAATCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctgg > 1:12671958‑M1/1‑22 (MQ=255) cacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACt > 1:22424139/1‑67 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc > 1:34515179/1‑68 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc < 1:2795266/68‑1 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTc > 1:12461436/1‑68 (MQ=255) cTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCg < 1:18473265/68‑1 (MQ=255) tGAATCATAAAGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggt > 1:5565177‑M1/1‑19 (MQ=255) tGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGc < 1:9784369/68‑1 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:12997223/1‑68 (MQ=255) aTCATAAAGCACTGGCCGTGAATCCATCACGTAGCCGCCAGCGCTGGCGTGCGGCGGCACTTCGCGga > 1:14489272/1‑68 (MQ=255) tCATAACGCCCTGGCCGGGAAACCATCACGTAGCCgccagggctttatgattcagtgctggtgctgga > 1:11249035‑M2/1‑35 (MQ=255) tCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgag < 1:32886873/68‑1 (MQ=255) tCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgag > 1:16710622/1‑68 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:27303742/68‑1 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:6363011/68‑1 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:4141558/68‑1 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:7647466/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:1804450/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:14091918/1‑68 (MQ=255) aGCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataa > 1:8960209‑M1/1‑9 (MQ=255) aGCCCTAGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAg > 1:26908685/1‑67 (MQ=255) gCCCTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaa > 1:32717530‑M1/1‑8 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:2591830/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:30220862/1‑68 (MQ=255) cccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaa > 1:20597198‑M1/1‑7 (MQ=255) cccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaa > 1:25142605‑M1/1‑7 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:29067239‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:8132727‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:18918314‑M1/68‑63 (MQ=255) ccTGGCggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaag < 1:24587646‑M1/68‑63 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:4880898/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:18182545/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:34227605/1‑68 (MQ=255) ccTGGCCGTGAATCCAACACGTAGCCgccagggctttatgattcagtgctggtgctggactataaaag > 1:28293595‑M2/1‑26 (MQ=255) cTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGcgcg < 1:1695507/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:25344045/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:18728326/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:16459323/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:10767231/68‑1 (MQ=255) gCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACa > 1:25590162/1‑68 (MQ=255) cggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaagcctgt > 1:28998895‑M1/1‑1 (MQ=255) cggctacgtgatggattcacggccagggctttatgattcagtgctggtgctggactataaaagcctgt > 1:10172018‑M1/1‑1 (MQ=255) | AGGTGCGGATGATCGACGGGTACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAT > CP009273/64490‑64624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |