| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 247 (0.590) | 13 (0.040) | 7/94 | NT | 5.7% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 226 (0.650) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 482 total aligned reads displayed.
GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435936‑2436067 | tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:3536529‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:16812049‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:6280684‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:22151272‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:1411573‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:11665510‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:29371478‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:32813707‑M1/64‑68 (MQ=255) tggcgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCcgcg > 1:9687576‑M1/64‑68 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:33853405‑M1/1‑67 (MQ=255) gCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGC > 1:4750978‑M1/1‑67 (MQ=255) cgattgccggaagcaccctgtgcgggggcctgatccgcgcaataaagcgttaccagccagCCGCGCCg < 1:7967573‑M1/8‑1 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGcc > 1:17747818‑M1/61‑67 (MQ=255) cgattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCg < 1:14804352‑M1/8‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:25235763‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:12847101‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:22978616‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt < 1:29591078‑M1/9‑1 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:26755447‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:20731654‑M1/60‑68 (MQ=255) gattgccggaagcacccagtgcgggggcctcatccgcgcaataaagcgttacctgccagCCGCGCCGt > 1:34533143‑M1/60‑68 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:26386281/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:10019193/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:24529447/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:31807159/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:14387589/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:12531335/68‑1 (MQ=255) gggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTg < 1:16252889/68‑1 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:3049648/1‑68 (MQ=255) ggCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg > 1:6927750/1‑68 (MQ=255) gcgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg < 1:24190672/67‑1 (MQ=255) gcgcAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTgg < 1:3899966/67‑1 (MQ=255) aaCGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTaa > 1:15308120/1‑67 (MQ=255) cGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCg < 1:31524513/68‑1 (MQ=255) aaTGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACgg > 1:8458245/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:11421398/1‑68 (MQ=255) tGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgc > 1:25455337/1‑68 (MQ=255) gCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:3735237/1‑68 (MQ=255) cTTTGCGGGGTGATGGAACAGACATTAGCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgca > 1:23415877/1‑67 (MQ=255) gttGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagc < 1:8908718/67‑1 (MQ=255) gCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagcagc > 1:23974438/1‑68 (MQ=255) gCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGgcagcagc < 1:33373471/68‑1 (MQ=255) gTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACg > 1:28936015/1‑68 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:6179474/1‑67 (MQ=255) ggAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGaa > 1:13720335/1‑67 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:32986190/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:13381425/1‑68 (MQ=255) aaCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:33521952/1‑68 (MQ=255) aCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAAcc > 1:8187411/1‑41 (MQ=255) aCAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcg > 1:21809559/1‑67 (MQ=255) cAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggc > 1:19427/1‑68 (MQ=255) cAGACATTACCGCTCCCCTGCTCCGCGCCGGGGTTTAACCGCACGGGCAGCAGCATACGGGAAgcggc > 1:8724806/1‑68 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:23148714/1‑68 (MQ=255) aGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAgcggcg > 1:5356189/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:8327013/1‑68 (MQ=255) cATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGAtt > 1:5569764/1‑68 (MQ=255) gcgttacctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCCGCAAACGGGAAGCGGCGAGTATcg < 1:34297535‑M1/54‑1 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTtatagcgccagcgacaacaacgcgctggcaataccaccgccgataa > 1:10980781‑M1/1‑22 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACTGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:1786600/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:2364221/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:31009548/1‑67 (MQ=255) ccGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcg > 1:18624389/1‑67 (MQ=255) gttacctgccagCCGCGCCGTGGGTTACCCGCACGGGCAGCAGCAAACGGGCCGCGGCGATTATcggc < 1:23266192‑M1/56‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:962403/68‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:4957565/68‑1 (MQ=255) cGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggc < 1:10593384/68‑1 (MQ=255) gCTCCCCTGCTCCGCGCCGTaatagcgccagcgacaacaacgcgctggcaataccaccgccgataatc > 1:17178522‑M1/1‑20 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:9358843/1‑68 (MQ=255) gCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATcggcg > 1:15721606/1‑68 (MQ=255) tCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggt < 1:1030104/68‑1 (MQ=255) cctgccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtg < 1:13057597‑M1/60‑1 (MQ=255) ccccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtg < 1:12363332/68‑1 (MQ=255) ctgccagCCGCGCCGTGGTTTACCCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:28232320‑M1/61‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg < 1:20193405/68‑1 (MQ=255) cccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtgg > 1:1662831/1‑68 (MQ=255) ccTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCggtggt > 1:4635257/1‑68 (MQ=255) ccagCCGCGCCGTGGTTTAACCGCACGGGCCGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAt < 1:24866362‑M1/64‑1 (MQ=255) ccagCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAt < 1:11919653‑M1/64‑1 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:32269576/1‑68 (MQ=255) gCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTAtt > 1:21137464/1‑68 (MQ=255) tCCGCGCCGTGGTTTAACCGCCCGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGGGGTATTg > 1:22533116/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGGGATTATCGGCGGTGGTATTg > 1:19554858/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:16364820/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:11235030/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:18057833/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:15919321/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:15159948/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:18201936/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:6585558/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:19147496/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:19740268/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:21437724/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:4308923/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:4087120/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:25990619/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:27190817/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:30056507/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg > 1:31288114/1‑67 (MQ=255) tCCGCGCCGTGGTTTAACCGCACGGGCAGCACCAAACCCGTAGCGCCGATTATCGGCGGTGGTATTg > 1:27645816/1‑67 (MQ=255) gCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTg < 1:29733573‑M1/66‑1 (MQ=255) | GGCTTTGGGCGCAAACGGGAAATGCTTTGCGGGGTGATGGAACAGACATTACCGCTCCCCTGCTCCGCGCCGTGGTTTAACCGCACGGGCAGCAGCAAACGGGAAGCGGCGATTATCGGCGGTGGTATTGCC > CP009273/2435936‑2436067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |