| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2436000 = | 247 (0.590) | 13 (0.040) | 7/94 | NT | 5.7% | coding (758/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme |
| ? | CP009273 | 2436103 = | 226 (0.650) | coding (861/2007 nt) | mnmC | fused 5‑methylaminomethyl‑2‑thiouridine‑forming enzyme methyltransferase and FAD‑dependent demodification enzyme | |||||
Only 100 of 351 total aligned reads displayed.
GGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGG > CP009273/2436036‑2436169 | gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGc < 1:1661299/68‑1 (MQ=255)gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGc < 1:8084410/68‑1 (MQ=255)gggAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGc < 1:30243362/68‑1 (MQ=255) caatacccccgccgataatcgccgcttcccgtttgctgctgcccgtgcggttaaaccacggcgcggc < 1:32753219‑M2/1‑1 (MQ=255) caataccaccgccgataatcgccgcttcccgtttgctgctgcccgtgcggttaaaccacggcgcggc < 1:11572104‑M2/1‑1 (MQ=255) caataccaccgccgataatcgccgcttcccgtttgctgctgcccgtgcggttaaaccacggcgcggc < 1:33639207‑M2/1‑1 (MQ=255) ataccaccgccgataatcgccgcttcccgtttgctgctgcccgtgcggttaaaccacggcgcggCTgg < 1:11919653‑M2/4‑1 (MQ=255) ataccaccgccgataatcgccgcttcccgtttgctgcggcccgtgcggttaaaccacggcgcggCTgg < 1:24866362‑M2/4‑1 (MQ=255) aaGCGGCGATTATCGGCGGTGGTATTGCCTGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTg < 1:21856180/67‑1 (MQ=255) aGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTgg < 1:10655897/67‑1 (MQ=255) aGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTgg < 1:12660892/67‑1 (MQ=255) ccaccgccgataatcgccgcttcccgtttgctgctgcccgtgcgggtaaaccacggcgcggCTGGCAg < 1:28232320‑M2/7‑1 (MQ=255) ggcgCTTATCGGCGGTGTTAGTGCCATCGCGTTGTTGTATCTGGCGCTATTACGGCGCGGCTGGCa < 1:27045717/66‑1 (MQ=255) ggcgATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAgg < 1:21346070/68‑1 (MQ=255) ggcgATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAg < 1:11368317/67‑1 (MQ=255) gccgataatcgccgcttcccgtttgctgctgcccgtgcggttaaaccacggcgcggCTGGCAGGTAAc < 1:3813842‑M2/12‑1 (MQ=255) gccgataatcgccgcttcccgtttgctgctgcccgtgcggttaaaccacggcgcggCTGGCAGGTAAc > 1:26752831‑M2/57‑68 (MQ=255) ttATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAAc < 1:8619115/67‑1 (MQ=255) tATCGGCGGTGGTATTGCCAGCGCGGTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGc < 1:20741674/68‑1 (MQ=255) ggcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTa > 1:18388248/1‑68 (MQ=255) gcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAt > 1:33884704/1‑68 (MQ=255) gcggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAt > 1:31521422/1‑68 (MQ=255) cggTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTAtt > 1:15701046/1‑68 (MQ=255) tggtATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTTTTgc > 1:29046012/1‑67 (MQ=255) tggtATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTgc < 1:269091/67‑1 (MQ=255) ttcgcgtttgctgcggcccgtgcggttaaaccacggcgcggCTGGCAGGTAACGCTTTATTGCGCGGa < 1:19560090‑M2/27‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:348046/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:24348006/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:23642799/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:22060301/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:30013913/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:5919173/68‑1 (MQ=255) aTTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:19143597/68‑1 (MQ=255) aTTGCCAGCGCGGTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGa < 1:15067129/68‑1 (MQ=255) tGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:30630503/1‑68 (MQ=255) tGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATg > 1:15510211/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTTTTGCGCGGATGAg > 1:13223892/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:6132733/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:13536511/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:33996913/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:25906764/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:23967639/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:5499614/1‑68 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCGATTACGGCGCGGCTGGCAGGTAACGCTTTTTTGCGCGGATgtg > 1:32558208/1‑66 (MQ=255) ccAGCGCGTTGTTGTCGCTGGCGCGATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:27803248/1‑68 (MQ=255) ccAGCGCGGTGTTGTCGCTGGCGCTATTACGGCGCGGATGGCTGGTAACGCATTATTGCGCGGATGAg > 1:25485702/1‑68 (MQ=38) cAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAgg < 1:32992573/68‑1 (MQ=255) cAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:21985046/1‑67 (MQ=255) cAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAg > 1:10044875/1‑67 (MQ=255) gcgTTGTTGTCGCTTGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:4541184/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGccc > 1:28122416/1‑67 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:18151848/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:12886026/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:14602501/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:32108775/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:23528832/66‑1 (MQ=255) gcgTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGcc < 1:6321585/66‑1 (MQ=255) tgttgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGc < 1:10545359/67‑1 (MQ=255) tgttgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCa < 1:31447211/68‑1 (MQ=255) tgttggCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGc < 1:7661638/67‑1 (MQ=255) gttgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGc > 1:24516209/1‑66 (MQ=255) tgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACt < 1:26554757/67‑1 (MQ=255) tgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTg > 1:31209207/1‑68 (MQ=255) tgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTg > 1:5185270/1‑68 (MQ=255) tgtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTg > 1:8323480/1‑68 (MQ=255) gtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTgg < 1:17285812/68‑1 (MQ=255) gtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTgg < 1:32002699/68‑1 (MQ=255) gtCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTgg < 1:22314624/68‑1 (MQ=255) gCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt < 1:17962151/67‑1 (MQ=255) cTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:20563666/1‑66 (MQ=255) cTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:17404095/1‑66 (MQ=255) cTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGt > 1:10175060/1‑66 (MQ=255) ggCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCtt < 1:9644274/68‑1 (MQ=255) ggCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCtt < 1:25429201/68‑1 (MQ=255) gcTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCg > 1:727668/1‑68 (MQ=255) ttACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCaa > 1:26098371/1‑68 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGTCAATc < 1:8876574‑M2/59‑1 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATc > 1:1127409‑M2/10‑68 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATc > 1:29701120‑M2/10‑68 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATc < 1:6376133‑M2/59‑1 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATc > 1:34533143‑M2/10‑68 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATc > 1:16100456‑M2/10‑68 (MQ=255) acggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATc > 1:22978616‑M2/10‑68 (MQ=255) cggcgcggCTGTCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCg < 1:1902922‑M2/60‑1 (MQ=255) ggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCTCCGCACTGGGTGCTTCCGGCAATCg > 1:3754764‑M2/8‑67 (MQ=255) ggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCg > 1:17818966‑M2/8‑67 (MQ=255) ggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCg > 1:9313119‑M2/8‑67 (MQ=255) ggcgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCg > 1:33526373‑M2/8‑67 (MQ=255) cgcggCTGGCAGGTTACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:22204060‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGcc < 1:9480540‑M2/62‑1 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:1411573‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:16812049‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:22600275‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:20153998‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:30825527‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:4057043‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:27437241‑M2/6‑68 (MQ=255) cgcggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCa > 1:29371478‑M2/6‑68 (MQ=255) ggCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAggg < 1:33324197‑M2/66‑1 (MQ=255) cTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAgggg < 1:25772332/67‑1 (MQ=255) | GGGAAGCGGCGATTATCGGCGGTGGTATTGCCAGCGCGTTGTTGTCGCTGGCGCTATTACGGCGCGGCTGGCAGGTAACGCTTTATTGCGCGGATGAGGCCCCCGCACTGGGTGCTTCCGGCAATCGCCAGGGG > CP009273/2436036‑2436169 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |