| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3701943 = | 48 (0.120) | 3 (0.010) | 3/88 | NT | 5.5% | intergenic (‑878/+33) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | CP009273 | 3701970 = | 65 (0.200) | intergenic (‑905/+6) | dppA/proK | dipeptide transporter/tRNA‑Pro | |||||
Only 100 of 225 total aligned reads displayed.
TCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > CP009273/3701876‑3702010 | tctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCTCTTGAGCTGCAGATGCaaa > 1:30765057/1‑68 (MQ=255)ctggtagcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcga < 1:23102906‑M1/1‑1 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCTGATGAGCTGCAGATGCaaaa > 1:24403730/1‑68 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGGAGATGCaaaa > 1:3598212/1‑68 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaa > 1:15242087/1‑68 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaa > 1:28292164/1‑68 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaa > 1:12870659/1‑68 (MQ=255) ctcGCTTCGCTCGAGTCGAACCTCCCTGCCCCCCGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaa > 1:22948018/1‑68 (MQ=255) gtagcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgaaaa < 1:30215632‑M1/4‑1 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCTCATGAGCTGCAGATGCaaaaaa > 1:27718206/1‑68 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGCGGTTCTCATCCGCATGAGCTGCAGATGCaaaaaa > 1:5504802/1‑68 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaaaa > 1:25432361/1‑68 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaaaa > 1:10851045/1‑68 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaaaa > 1:33009924/1‑68 (MQ=255) cgcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaaaa > 1:34111125/1‑68 (MQ=255) gcttcgctCGAGTCGCACCTCCCTGCCCCCCCAGGATGTAATCCTCATGAGCTGCAGATGCaaaaaa > 1:21628734/1‑67 (MQ=14) gcttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg < 1:30419696/68‑1 (MQ=255) cttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg > 1:20447327/1‑67 (MQ=40) cttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg > 1:28166771/1‑67 (MQ=40) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgcccaaattcgAAAAg < 1:34250234‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattctAAAAGc > 1:4713525‑M1/63‑68 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:23178602‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:17715217‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg > 1:2375388‑M1/63‑67 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:24521847‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:21867863‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:18199599‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:18907720‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:32054029‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:16520926‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:3932798‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:9359327‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:1316706‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:8846760‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:6907844‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg > 1:7132183‑M1/63‑67 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:8627383‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:11600413‑M1/5‑1 (MQ=255) agcgcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAg < 1:11811512‑M1/5‑1 (MQ=255) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCaaaaaat > 1:14532130/1‑65 (MQ=39) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg > 1:16683090/1‑66 (MQ=39) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg > 1:10050882/1‑66 (MQ=39) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg > 1:6215935/1‑66 (MQ=39) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg > 1:13551241/1‑66 (MQ=39) ttcgctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGc < 1:4197232/67‑1 (MQ=39) gcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTg > 1:8716613‑M1/60‑68 (MQ=255) gcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTg > 1:9855308‑M1/60‑68 (MQ=255) gcacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTg > 1:1298767‑M1/60‑68 (MQ=255) gcacttcgttcgggacgaagggggcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTg > 1:17970083‑M1/60‑68 (MQ=255) cacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCt < 1:24089847‑M1/8‑1 (MQ=255) cacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCt < 1:7666181‑M1/8‑1 (MQ=255) cacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCt < 1:3754131‑M1/8‑1 (MQ=255) cacttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCt < 1:15536815‑M1/8‑1 (MQ=255) cacttcgttcgggacgaaggggtcggaggttcgaatcctctagcaccgaccaaattcgAAAAGCCt < 1:22420485‑M1/8‑1 (MQ=255) ctCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGc > 1:17617336/1‑67 (MQ=31) acttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTGc < 1:4115087‑M1/10‑1 (MQ=255) acttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTGc > 1:14429831‑M1/58‑67 (MQ=255) acttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTGc > 1:6604531‑M1/58‑67 (MQ=255) acttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTGc < 1:7399221‑M1/10‑1 (MQ=255) acttcgttcgggacgaaggggtcggaggttcgaatcctctatcaccgaccaaattcgAAAAGCCTGCt > 1:26559641‑M1/58‑68 (MQ=255) gAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTc > 1:27452381/1‑68 (MQ=31) caccgaccaaattagAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTc < 1:22596141‑M1/53‑1 (MQ=255) aGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCg > 1:13851022/1‑68 (MQ=33) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:8540519/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:12218828/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:11849581/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:5976362/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:11309937/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:14982012/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:25641348/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:15943188/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:16366169/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:21057467/1‑68 (MQ=35) gCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGa > 1:31708541/1‑68 (MQ=35) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGaa > 1:31348521/1‑67 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGaa > 1:21470521/1‑67 (MQ=37) tGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGaa > 1:14723217/1‑67 (MQ=37) gCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAAcc < 1:32644438/68‑1 (MQ=40) gCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAAcc < 1:11132071/68‑1 (MQ=40) gCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTAATAGAGGATTCGAAcc < 1:34316869/68‑1 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGCGGGTGCTTTTCGAATTTGGTCGGTGATAGAGGATTCCAACCt > 1:30518816/1‑67 (MQ=11) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCt > 1:4028177/1‑67 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCt > 1:4531361/1‑67 (MQ=255) aGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCt > 1:19070225/1‑67 (MQ=255) aTGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCg > 1:24142522/1‑68 (MQ=255) aTGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCg > 1:12518441/1‑68 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTcc < 1:22098496/66‑1 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTc < 1:34497709/65‑1 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTc < 1:33658602/65‑1 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTc < 1:13653176/65‑1 (MQ=255) tGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCg > 1:29419057/1‑67 (MQ=255) cAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAc > 1:18431827/1‑67 (MQ=255) aaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAcccc < 1:6106095/68‑1 (MQ=255) aaaaaGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAcccc < 1:27706360/68‑1 (MQ=255) aaaaaGCCTGCTCGGTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGAcccc < 1:10742666/68‑1 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt > 1:8150777‑M1/1‑68 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt < 1:1261817‑M1/68‑1 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt < 1:17392042‑M1/68‑1 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt < 1:16763997‑M1/68‑1 (MQ=255) AAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCt < 1:32544855‑M1/68‑1 (MQ=255) | TCTCGCTTCGCTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGCCTGCTCGTTGAGCAGGCTTTTCGAATTTGGTCGGTGATAGAGGATTCGAACCTCCGACCCCT > CP009273/3701876‑3702010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |