| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3999966 | 498 (1.190) | 25 (0.060) | 7/108 | NT | 5.5% | coding (743/1830 nt) | recQ | ATP‑dependent DNA helicase |
| ? | CP009273 | = 4000004 | 378 (0.940) | coding (781/1830 nt) | recQ | ATP‑dependent DNA helicase | |||||
Only 100 of 633 total aligned reads displayed.
CAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCT > CP009273/3999899‑4000032 | tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:29825833/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:19358338/67‑1 (MQ=255) tGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGt < 1:22349719/67‑1 (MQ=255) gATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTag < 1:5595237/68‑1 (MQ=255) tGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaa > 1:32202606/1‑68 (MQ=255) tGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaa > 1:27620408/1‑68 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAATGTagaag > 1:15772416/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:16107346/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:15638249/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:33376958/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTagaag > 1:25377849/1‑67 (MQ=255) cgcTACGTGCAGGAACAGCGCCGTAAGTCAGGCATTATCTACTGCAACACCCGCGCGAAAGTagaag > 1:33096561/1‑67 (MQ=255) cAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgc > 1:5931955/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGCCACCGCTgcgc > 1:18985112/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:22909669/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:34792345/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:31004989/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:32688454/1‑68 (MQ=255) ggAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgc > 1:31491399/1‑68 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:16604597/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg < 1:3653106/67‑1 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:6788010/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:34130388/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg < 1:7438971/67‑1 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:23721419/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:5180685/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:29160730/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:13005674/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg < 1:25876766/67‑1 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:11797476/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCGgcgcg > 1:32482912/1‑67 (MQ=255) aaCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCCCTgcgcg > 1:13867244/1‑67 (MQ=255) aaCAGAGCGGTAAGTCAGGCATTATATACAGCAACAGCCGCCCGAAAGTAGAATACACCGCAgcgcgc > 1:29592590/1‑68 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCGACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:23432726/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:25103304/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:8728293/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:22700551/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:30581090/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:14593409/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:17918734/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTgcgcg > 1:6111208/1‑66 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 1:4257828/68‑1 (MQ=255) aCAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGcc < 1:7177328/68‑1 (MQ=255) aGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt > 1:18323330/1‑67 (MQ=255) gcgGTAATTCAGTCATTATCTACTGCAACAGCCGCTCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:27136993/64‑1 (MQ=255) gcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:9086182/64‑1 (MQ=255) gcgGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCt < 1:24417719/64‑1 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGc < 1:14985078/67‑1 (MQ=255) tAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGc < 1:17596756/67‑1 (MQ=255) aaGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCaa > 1:13531324/1‑68 (MQ=255) aGTCAGGCATTTTCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAg > 1:4651158/1‑68 (MQ=255) cAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAgg < 1:8181980/66‑1 (MQ=255) cAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGa < 1:8475002/68‑1 (MQ=255) cAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGa < 1:30451097/68‑1 (MQ=255) aGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGaa > 1:26650405/1‑68 (MQ=255) gCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAtt < 1:16851141‑M2/68‑3 (MQ=255) aTTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTa > 1:20150235/1‑67 (MQ=255) ttATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgc < 1:20351361/68‑1 (MQ=255) tATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcg < 1:7896082/68‑1 (MQ=255) aTCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAgcgc > 1:33788739/1‑68 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGcgcg > 1:10108947/1‑68 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGcgcg > 1:11028450/1‑68 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGcgcg > 1:30185685/1‑68 (MQ=255) tCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGcgcg > 1:951433/1‑68 (MQ=255) cTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGcgcg > 1:26046271/1‑67 (MQ=255) tACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggc > 1:28025663/1‑68 (MQ=255) aCTGCAACAGCCGCGCTAAttcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcg > 1:24788723‑M1/1‑19 (MQ=255) aCTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:17339520/1‑68 (MQ=255) aCTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:3966687/1‑68 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCgcggcg > 1:10598883/1‑67 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg < 1:28420974/68‑1 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg < 1:16342422/68‑1 (MQ=255) cTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg < 1:13351572/68‑1 (MQ=255) tGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCggcggc < 1:28677080/68‑1 (MQ=255) gCAACAGCCGCGCTAAttcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:23333637‑M1/1‑16 (MQ=255) gCAACAGCCGCGCTAAttcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:1535419‑M1/1‑16 (MQ=255) gCAACAGCCGCGCTAAttcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:29300852‑M1/1‑16 (MQ=255) gCAACAGCCGCGCTAAttcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:32888946‑M1/1‑16 (MQ=255) gCAACAGCCGCGCTAAttcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgtt > 1:12771712‑M1/1‑16 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:14116986/1‑66 (MQ=255) gCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGcggcgg > 1:26342613/1‑66 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAttagcgcggctgttgc > 1:34507581‑M2/1‑52 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAttagcgcggctgttgc > 1:2405351‑M2/1‑52 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAttagcgcggctgttgc > 1:17107908‑M2/1‑52 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:25520083/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:6364494/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCt < 1:18205938/67‑1 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:2120355/1‑68 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTa > 1:11456896/1‑68 (MQ=255) aaCAGCCGCGCGAAAGTAGAAGACACCCCTGCGCGCCTGCAAAGAAAGGGAATTAGCGCGGCGGCCTa > 1:21602655/1‑68 (MQ=255) aCAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTAt < 1:31707689/68‑1 (MQ=255) cAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATc > 1:4831588/1‑68 (MQ=255) cAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATc > 1:10324732/1‑68 (MQ=255) ccGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt > 1:1867539/1‑67 (MQ=255) ccGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCAt > 1:21957422/1‑67 (MQ=255) cgcgcgAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAAttagcgcggctgttgcagt > 1:31190393‑M2/1‑46 (MQ=255) gcgAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCgg < 1:20609156/68‑1 (MQ=255) gAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCggg < 1:12074741/67‑1 (MQ=255) gAAAGAAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCggg < 1:26836/67‑1 (MQ=255) attcccttgctttgcaggcgcgcagcggtgtcttctactttcgcgcggctgttgcagtagataatg > 1:7326684‑M1/1‑1 (MQ=255) | CAGTTGATGCGCTACGTGCAGGAACAGCGCGGTAAGTCAGGCATTATCTACTGCAACAGCCGCGCGAAAGTAGAAGACACCGCTGCGCGCCTGCAAAGCAAGGGAATTAGCGCGGCGGCCTATCATGCCGGGCT > CP009273/3999899‑4000032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |