| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 910549 = | 93 (0.220) | 6 (0.020) | 3/98 | NT | 8.2% | intergenic (‑236/+259) | ybjE/aqpZ | putative transporter/aquaporin Z |
| ? | CP009273 | 910582 = | 53 (0.150) | intergenic (‑269/+226) | ybjE/aqpZ | putative transporter/aquaporin Z | |||||
Only 100 of 354 total aligned reads displayed.
GAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGG > CP009273/910515‑910649 | gacggCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCg < 1:2131296/65‑1 (MQ=1) tcccttacggctaccgggtcGGGCGCGTTTTTCAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTa < 1:19835916‑M1/48‑1 (MQ=255) cttccggctaccgggtcgggcgcgaggtaacatccctgtaaaccgcgcccGACCCGGTAGCCGTAAgg < 1:23398003‑M2/18‑1 (MQ=255) ttccggctaccggggcgggcgcgaggtaacatccctgtaaaccgcgcccGACCCGGTAGCCGTAAggg < 1:5080718‑M2/19‑1 (MQ=255) tacggctaccggggcgggcgcgaggtaacatccctgtaaaacgcgcccGACCCGGTAGCCGTAAGGGa < 1:32653696‑M2/20‑1 (MQ=255) ATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:25890450‑M2/1‑68 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg < 1:18670143‑M2/67‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:10050758‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:7138555‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:30739598‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:11988107‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:4457552‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg < 1:22416254‑M2/67‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:14990161‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAg > 1:31435701‑M2/1‑67 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:23925390‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:31147137‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:11871315‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:7469277‑M2/68‑1 (MQ=255) TGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGt < 1:20621072‑M2/68‑1 (MQ=255) GTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTc > 1:16974323‑M2/1‑68 (MQ=255) GTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTc > 1:22524516‑M2/1‑68 (MQ=255) GTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTc > 1:10574589‑M2/1‑68 (MQ=255) GGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCg < 1:10238219‑M2/67‑1 (MQ=255) GGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCg < 1:29812200‑M2/67‑1 (MQ=255) GGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCg < 1:32230952‑M2/67‑1 (MQ=255) GCTGAGGGCGCGTTTTGCAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:21121629‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:25250419‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:2926813‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:23254742‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:3807368‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:4161530‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:9312885‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:19430576‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:1325186‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:14813231‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAgg > 1:16081591‑M2/1‑68 (MQ=255) GCTGAGGGCGCGTTTAACACGGATGTTACCTCGCGCCCGACCCGCTAGCCGTAAGGGATAAGTCGAgg > 1:11005691‑M2/1‑68 (MQ=255) TGAGGGCGCGTTTTTCAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGc > 1:8466336‑M2/1‑68 (MQ=255) TGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCGGGTAGCCGTAAGGGATAAGTCGAGGGc < 1:20346442‑M2/68‑1 (MQ=255) TGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGc > 1:28641781‑M2/1‑68 (MQ=255) TGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGc > 1:7828526‑M2/1‑68 (MQ=255) GGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:16750705‑M1/68‑1 (MQ=255) GGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAc > 1:7289843‑M1/1‑67 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCTGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:6754392‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:30662893‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:12799759‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:26139317‑M1/67‑1 (MQ=255) GGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCAcc < 1:32064500‑M1/67‑1 (MQ=255) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGa > 1:23518869/1‑68 (MQ=35) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGa > 1:26846614/1‑68 (MQ=35) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGa > 1:34176082/1‑68 (MQ=35) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGa > 1:18910189/1‑68 (MQ=35) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAt > 1:27803278/1‑68 (MQ=35) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAt > 1:7620933/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:32323148/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:32572383/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:31666908/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:24067867/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:34724242/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:4924336/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:6129963/1‑68 (MQ=35) gggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:27382652/1‑68 (MQ=35) atccctgtaaaacgcgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtt > 1:5345139‑M2/20‑68 (MQ=255) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:29831449/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:12228016/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:28226900/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGAtttt > 1:30248154/1‑68 (MQ=35) gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGACTAtttt > 1:23755473/1‑68 (MQ=255) tACCTCGCGCCCGACCCGGTAGGCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTc > 1:17810754/1‑67 (MQ=255) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTc > 1:25069510/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCg > 1:8806084/1‑67 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGc < 1:27517319/68‑1 (MQ=35) aCCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGc < 1:12423527/68‑1 (MQ=35) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGcc > 1:25496294/1‑68 (MQ=35) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGcc > 1:28743600/1‑68 (MQ=35) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGcc > 1:11250431/1‑68 (MQ=35) ccTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGcc > 1:15539696/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:32971762/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:17389768/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:5995267/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:17492314/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:11554743/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:19299178/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:33278732/1‑68 (MQ=35) cTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCa > 1:8686238/1‑68 (MQ=35) cgcgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCaga > 1:909081‑M2/8‑68 (MQ=255) cgcgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCaga < 1:18425244‑M2/61‑1 (MQ=255) cgcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCagag > 1:21961335‑M2/6‑67 (MQ=255) gcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGc < 1:4028538‑M2/63‑1 (MQ=255) gcccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGc < 1:22819251‑M2/63‑1 (MQ=255) cccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGccc > 1:33958559‑M2/4‑68 (MQ=255) cccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGccc > 1:22141265‑M2/4‑68 (MQ=255) ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCg < 1:6887806‑M2/66‑1 (MQ=255) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:33572892/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:29745762/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:28120040/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:18179287/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:20068675/68‑1 (MQ=35) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCggg < 1:1072852/68‑1 (MQ=35) | GAAGGCCGGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGG > CP009273/910515‑910649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |