| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4306574 = | 181 (0.410) | 14 (0.040) | 9/98 | NT | 8.8% | coding (462/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | CP009273 | 4306632 = | 132 (0.340) | coding (404/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
GCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4306646‑4306574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT > CP009273/4306632‑4306696 GCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGC > 1:15785922/1‑68 CACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCA > 1:228097/1‑68 CACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCA > 1:15073464/1‑68 ACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAG < 1:30837269/68‑1 ACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAG < 1:32914231/68‑1 ACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAG < 1:34983067/68‑1 ACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCA > 1:9539314/1‑67 ACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCA > 1:10272098/1‑67 ACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCA > 1:33465793/1‑67 CCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGC < 1:14429675/68‑1 GTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGC < 1:36942705/68‑1 TGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGA < 1:8346280/68‑1 TGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGA < 1:1256105/68‑1 TGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGA < 1:11741818/68‑1 TGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGGGCAGCGCAGA < 1:33357239/68‑1 GCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGAT < 1:35046048/68‑1 TCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCA > 1:3181601/1‑68 TCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCA > 1:8994322/1‑68 CTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAG < 1:24157394/68‑1 CTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAG < 1:24568101/68‑1 GCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGAC < 1:27610850/68‑1 GCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGG > 1:33346562/1‑68 CCGCATCACACCCCGCTGCCGCTGTTTCAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGC < 1:34214791/67‑1 ACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCG > 1:27189646/1‑68 ACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCG > 1:16617011/1‑68 ACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCG > 1:28372911/1‑68 GCTGCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTT > 1:18430212/1‑68 GCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTT > 1:34974710/1‑65 GCCGCTGTTTGAAAAACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTT > 1:4815228/1‑65 ACTGGTGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATG > 1:28145484/1‑67 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGTAGTTGA > 1:33055056/1‑68 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:11487818/1‑68 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:27531876/1‑68 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:27417245/1‑68 GCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGAGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:23230676/1‑68 GCAGCGCAGATGCAGACGGTGCTAGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:33701510/1‑68 CAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGA > 1:62175/1‑67 tGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATC > 1:17588519/2‑68 AGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATC > 1:5799453/1‑68 GCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:2203479/1‑68 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT < 1:16641599/67‑1 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT < 1:11258877/67‑1 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT < 1:25630726/67‑1 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT < 1:25967029/67‑1 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:35014714/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:20770179/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:31917501/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:8161090/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:25979673/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:8582292/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:8624826/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:26789448/1‑66 GCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCA > 1:26664805/1‑66 GCACCGTCTGCATCTGCGCTGCGAACTGCCGCATCACACCACGCTGCCGCTGTTTGAAAAACTGGTGCAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4306646‑4306574‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAT > CP009273/4306632‑4306696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |